Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0737 ATGGATGGGAACCCTCCTCCTCCAATTCAAGTCCCATCCGAAACCATGTTTTCAACCTCCTCAGCATCAGGATCAACACCAACCACTCCAACTCCAAGTTCAACAGCATCATCACCATCCGGCCGTTACCGAGGGACACGGTGCAGGAGCGGGAAATGGGTGTCGGAGATAAGGGAGCCGCGTAAAACGAAGCGCATTTGGCTTGGGACATACCCAACACCAGAGATGGCTGCAGCTGCATACGATGTTGCTGCTCTCGCGTTGAAGGGTCCTGATACTCCTCTCAACTTCCCCAATTCCATTCTCTCGTACCCTATCCCTGCTTCATTGTCAGCTCCTGATATACGCGCCGCTGCGGCTGCTGCTGCTGCTGCTGCTGCTGAAGCTAGGCTCGTGAGGCCACCACAACAAGGCACTTCTTCACAGCAAGAGCAAGGGCAACCTCATCAGGGTGGTGCTGGTGGTATTGGGAGCTCTTCGAGTGGACAAGGGTTAACGGAGGAGCAGCAATACATTGATGAGGATGAGCTGTTGAACATGCCGAATCTGATTGATGACATGGCCAGGGGAATGCAGGTTAGTCCCCCAAGGATTGGGTCCTTGCCCTTCTCTTCCGATGATTCGCCCGGGAATTCGGATGTGGATAACCTTTGGAATTATTAA 663 0.5324 MDGNPPPPIQVPSETMFSTSSASGSTPTTPTPSSTASSPSGRYRGTRCRSGKWVSEIREPRKTKRIWLGTYPTPEMAAAAYDVAALALKGPDTPLNFPNSILSYPIPASLSAPDIRAAAAAAAAAAAEARLVRPPQQGTSSQQEQGQPHQGGAGGIGSSSSGQGLTEEQQYIDEDELLNMPNLIDDMARGMQVSPPRIGSLPFSSDDSPGNSDVDNLWNY* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0737 220 Gene3D AP2/ERF domain 42 100 IPR036955 GO:0003700|GO:0006355
Dod06g0737 220 CDD AP2 42 100 IPR001471 GO:0003700|GO:0006355
Dod06g0737 220 Pfam AP2 domain 47 90 IPR001471 GO:0003700|GO:0006355
Dod06g0737 220 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 37 220 - -
Dod06g0737 220 ProSiteProfiles AP2/ERF domain profile. 42 98 IPR001471 GO:0003700|GO:0006355
Dod06g0737 220 MobiDBLite consensus disorder prediction 123 220 - -
Dod06g0737 220 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF026 37 220 - -
Dod06g0737 220 SUPERFAMILY DNA-binding domain 43 100 IPR016177 GO:0003677
Dod06g0737 220 MobiDBLite consensus disorder prediction 1 56 - -
Dod06g0737 220 MobiDBLite consensus disorder prediction 13 44 - -
Dod06g0737 220 SMART rav1_2 42 104 IPR001471 GO:0003700|GO:0006355
Dod06g0737 220 MobiDBLite consensus disorder prediction 134 168 - -
Dod06g0737 220 MobiDBLite consensus disorder prediction 198 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0737 Dod-Chr6 8923615 8925259 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0737 35 220 AP2-EREBP Transcription Factor Family AT5G52020 53.439 3.34e-48 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dod06g0737 AP2 2.2e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0737 - - gmx:100813560 238.81