Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0736 ATGTTTTCCCTCACTCATCTCACCGACCCACAAGCGGGTACTAGCAGCTCGGAGAGTATTAGTATTATGTCGTCGTCATCGCCGGCGTCGGAGGGGGAGGTGGTTTTGGCGGCTAGCCACCCGAAGAAGAGGGCGGGGAGGAAGAAGTTCAGGGAGACGCGCCACCCTGTGTACCGCGGCGTGCGGCGGAGGAACTCCGGCAAGTGGGTTTGTGAGGTCAGGGAGCCAAACAAGAAGACAAGGATATGGCTTGGAACATTCCCAAACGCCGAGATGGCGGCACGTGCGCACGACGTGGCGGCGATAGCGTTGAGGGGGAGGTCCGCTTGCCTCAACTTCGCCGACTCCGCCTGCCTCCCGGTTCCCGCCACGGCGGACGCCAGGGATATCCAGAGGGCGGCGGCAGAGGCGGCGGAGGCCTTCAGGCCGGTGGCGGAGCTGGAGAATTTTGAGGTTAGGCGAGAGGAGGGTGGTGATGCGGCGGTGGCCGAGGAGGTTACAGCGAAGGCGGCGGAGGAGGAGAAGGAAGGGGTGCCGGAGATGTGGAGGACCATGGCGCTGATGTCTCCTACACATTACTTGGGGAGTGAGTATGGCGGTGATGACGTGGAATTATTTGATGATGCTGAAGTATCCTTGTGGAGTTATTCCATTTAA 657 0.6043 MFSLTHLTDPQAGTSSSESISIMSSSSPASEGEVVLAASHPKKRAGRKKFRETRHPVYRGVRRRNSGKWVCEVREPNKKTRIWLGTFPNAEMAARAHDVAAIALRGRSACLNFADSACLPVPATADARDIQRAAAEAAEAFRPVAELENFEVRREEGGDAAVAEEVTAKAAEEEKEGVPEMWRTMALMSPTHYLGSEYGGDDVELFDDAEVSLWSYSI* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0736 218 Pfam AP2 domain 56 106 IPR001471 GO:0003700|GO:0006355
Dod06g0736 218 SUPERFAMILY DNA-binding domain 57 116 IPR016177 GO:0003677
Dod06g0736 218 PRINTS Ethylene responsive element binding protein signature 80 96 IPR001471 GO:0003700|GO:0006355
Dod06g0736 218 PRINTS Ethylene responsive element binding protein signature 58 69 IPR001471 GO:0003700|GO:0006355
Dod06g0736 218 Gene3D AP2/ERF domain 57 115 IPR036955 GO:0003700|GO:0006355
Dod06g0736 218 MobiDBLite consensus disorder prediction 31 50 - -
Dod06g0736 218 CDD AP2 58 116 IPR001471 GO:0003700|GO:0006355
Dod06g0736 218 MobiDBLite consensus disorder prediction 1 26 - -
Dod06g0736 218 ProSiteProfiles AP2/ERF domain profile. 57 114 IPR001471 GO:0003700|GO:0006355
Dod06g0736 218 PANTHER CBF/DREB1 TRANSCRIPTION FACTOR 10 218 - -
Dod06g0736 218 SMART rav1_2 57 120 IPR001471 GO:0003700|GO:0006355
Dod06g0736 218 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 10 218 IPR045277 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0736 Dod-Chr6 8902785 8906103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0736 9 216 AP2-EREBP Transcription Factor Family AT5G51990 50.442 2.52e-59 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dod06g0736 AP2 8.4e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0736 - K09286 aprc:113872706 246.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3105 02 65861889 65863360 Dod06g0736 06 8902785 8906103 ECH
Dod06g0736 06 8902785 8906103 Dod06g0736 06 8902785 8906103 ECH
Dod02g3105 02 65861889 65863360 Dod06g0736 06 8902785 8906103 PCT