Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0734 ATGGGTGTTGCCAAGAGCAACGGCAGCAGTGAACCTTCGACTTCATACAATTGTTACAAAGTAGCAAGCTTGACTGAAACAATATTAGACACAAAGCAGACCTCCAATCTGAGAGATCGGTACGATCTTGGGAAGCAGTTAGGGTGGGGACAGTTTGGTGTCATAAGAGCCTGCTCTGACAAGCGGACTGGAGAGGTATTGGCCTGCAAATCGATTGCGAAAGATAGGTTGGTTACTTTGGATGATCTACGAAGTGTCAAACTCGAGATTGAGATAATGACTAGGTTATCTGGGCACCCAAATGTTGTAGATCTCAAGGCAGTTTACGAAGAGGAAGATTTTGTTCATTTGGTGATGGAGCTTTGCGCTGGAGGGGAGCTGTTTCATCGGTTAGAGAAACACGGACGGTTTTCTGAATCTGAAGCTAGGGTTCTCTTCAGGCATCTCATGCAGGTGGTTTTGTATTGTCATGAAAATGGGGTTGTTCATAGAGATTTGAAGCCTGAGAACATTCTCTTAGCAACTAGGTCATCCTCGTCTCCAATTAAATTGGCAGACTTTGGGCTTGCAACCTACATCAAGCCTGGACAGAGTTTGCATGGGTTAGTTGGGAGTCCATTCTATATAGCTCCAGAGGTACTGGCAGGTGCATATAACCAAGCTGCTGATGTTTGGAGTGCAGGGGTTATTCTTTACATTCTACTGAGTGGGATGCCTCCATTTTGGGGGAAGACCAAGTCACGGATATTTGAAGCTGTTAAGGCGGCTGACCTGAGGTTCCCCTCTGAACATTGGGATCGCATTTCTGAATCAGCTAAGGATTTGATTAGGGGAATGCTCTGCGTTGAACCTTCTAACAGGCTCACTGCCGGAGAGGTTTTGGATCATTGCTGGATGGAAAGCAATCAAACAAATCCTGAAACGCTAAGTGAACAAAAAATTGGAAGTTGTGGGGAATGGGGTGTTGGTACTGAGTCATTCTCTGCCTCATTTATGTCCAGGAATCAGGACATCAGCTTTGGCGGTGGATCACCAACATGTGATGCTCAGTCACCTACATTCACATGCAGGTCATCATTTTCTTCCTTTTTCGCAGAGCCAGCAGCAACTCCTTGTTCTGTTCCTGGTGGGTTTTCATTTCAGAGCACAGGTAGTTCCATCAGTCTGGAATTTTCTTCGCCCATTCCGTCAATGCCTAGCTTTGCATTTCTCAGCCCTGATCCTGTTGTTGAGCAAAGGAGTCGTCCATTAGAGTTCTCAGCTGACACATCGGATGTGAATGCCATCACTGGAGATTCTCCCCTTTGCTTTGGACCTGGCGTTAAAGAAATGGATCGTAAGCCTGTTGATGCTAAAAGGGCAGGCGGAACGAACGGGCATAGAGCATTGGGATTCCACAACAAGAGAAACCGGACCATTGGACTTGGTGAGCGTGAGCTTGACCTTGTGGTGACTGAATCAGTCATTCGCTGGTCATCATGCACACAACTTCCTACATCACTGAGATCATCTCTTGTCTGTTGA 1524 0.4639 MGVAKSNGSSEPSTSYNCYKVASLTETILDTKQTSNLRDRYDLGKQLGWGQFGVIRACSDKRTGEVLACKSIAKDRLVTLDDLRSVKLEIEIMTRLSGHPNVVDLKAVYEEEDFVHLVMELCAGGELFHRLEKHGRFSESEARVLFRHLMQVVLYCHENGVVHRDLKPENILLATRSSSSPIKLADFGLATYIKPGQSLHGLVGSPFYIAPEVLAGAYNQAADVWSAGVILYILLSGMPPFWGKTKSRIFEAVKAADLRFPSEHWDRISESAKDLIRGMLCVEPSNRLTAGEVLDHCWMESNQTNPETLSEQKIGSCGEWGVGTESFSASFMSRNQDISFGGGSPTCDAQSPTFTCRSSFSSFFAEPAATPCSVPGGFSFQSTGSSISLEFSSPIPSMPSFAFLSPDPVVEQRSRPLEFSADTSDVNAITGDSPLCFGPGVKEMDRKPVDAKRAGGTNGHRALGFHNKRNRTIGLGERELDLVVTESVIRWSSCTQLPTSLRSSLVC* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0734 507 ProSitePatterns Protein kinases ATP-binding region signature. 47 74 IPR017441 GO:0005524
Dod06g0734 507 SMART serkin_6 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0734 507 PANTHER SERINE/THREONINE-PROTEIN KINASE 6 500 - -
Dod06g0734 507 CDD STKc_CAMK 40 298 - -
Dod06g0734 507 Gene3D Transferase(Phosphotransferase) domain 1 128 320 - -
Dod06g0734 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Dod06g0734 507 SUPERFAMILY Protein kinase-like (PK-like) 38 376 IPR011009 -
Dod06g0734 507 Pfam Protein kinase domain 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0734 507 Gene3D Phosphorylase Kinase; domain 1 43 127 - -
Dod06g0734 507 ProSiteProfiles Protein kinase domain profile. 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0734 507 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 34-LIKE 6 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0734 Dod-Chr6 8888466 8893714 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0734 33 307 EF-hand Containing Proteins AT2G17290 52.000 3.03e-95 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Dod06g0734 Pkinase 2.1e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0734 - - gmx:100776088 814.683