Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0728 ATGGAAGCGAATCCTTCACAAAACGGCGGCTTCAACGAAGAAGACGACAACACACTCTCTCCTTCCGAGACGACACCAATGGCGAACCCGCCGGAATCCACTTTCCCGGAACCGGAACCGGAACCGCCGTCACCTGTGGCTGAGGAGAAGGCGGCGGCGGCACCCCTGAAAGAGGAGCTCCCGGAAACCGAACAGAGCCTCGAAGAGCGGTTGGGGGTTGTTCCGTCGCCGTTGACGGCTATTGTTCCTGCGGCGGCGAAGAAGCCGTCGAGGGACCGTCACACGAAGGTGGAGGGACGCGGGCGGAGAATCCGTATGCCGGCTACGTGCGCCGCCAGGATCTTCCAACTGACAAGGGAACTCGGCCACAAGTCCGACGGGGAAACAATACGGTGGTTGCTGGAGCATGCTGAGCCCGCAATCATAGAAGCCACCGGCACTGGAACAATCCCGGCGATTGCGGTGTCCGTCGGTGGAACACTCAAGATCCCAACCTCATCAGCCGCAAGACCTAACGGCGAAGACACACAGAGGATAAAAAGAAGAAGAGCATCGAACAGCGAGTTCATTGACATGAACGAAGAAGACCAAGTTTCAGTCTCTTCAGGCCTCGCACCAATCGCACAAACAGCATATGGCAGTGCTGCCAGTGCTACTGGTATTGGTGTTGGTGGTCTTGTTCCTATATGGCCTGTTTCTAATGGTGGTGGTGCAGGGCCTTTCTTCGTGTTTCCAAATGGTTCTTCTTCTTCTGGTGGTGGTGTTGTGAACCAGGTGCCTCATTATTGGGCTATTCCTGCAAATGCGGCACCATTTTTCAACGTTCAAGCGAGGCCCATTTCGGGGTTTGTTTCGGCAGGGGAGCAATTAGGCCATGTGGTGATGCATCATCATCCTTTGGGGTCCACTTCTTCTGATGGCTCTGCCAACTCTTCCTCCACTTTGGCTCCTTCGTTGAGCTCAGGAACAAGTGCTGCTGCTACTACTACTGCATCTGCTCCTGTTACTACTACTTCCACCACCTCGTCTTCTCCTACTGGTGCCACGACCACTCAGATGCTCAGGGATTTCTCTTTGGAAGTTTATGATAAGAAAGAGTTGCAGTTCTTGGGACGCTCTAGTGCTTCTGGGAAGTCGGAACAACCACCCAGTTCGAAGCCTTCAAATTGA 1170 0.5419 MEANPSQNGGFNEEDDNTLSPSETTPMANPPESTFPEPEPEPPSPVAEEKAAAAPLKEELPETEQSLEERLGVVPSPLTAIVPAAAKKPSRDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIEATGTGTIPAIAVSVGGTLKIPTSSAARPNGEDTQRIKRRRASNSEFIDMNEEDQVSVSSGLAPIAQTAYGSAASATGIGVGGLVPIWPVSNGGGAGPFFVFPNGSSSSGGGVVNQVPHYWAIPANAAPFFNVQARPISGFVSAGEQLGHVVMHHHPLGSTSSDGSANSSSTLAPSLSSGTSAAATTTASAPVTTTSTTSSSPTGATTTQMLRDFSLEVYDKKELQFLGRSSASGKSEQPPSSKPSN* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0728 389 MobiDBLite consensus disorder prediction 1 72 - -
Dod06g0728 389 MobiDBLite consensus disorder prediction 1 30 - -
Dod06g0728 389 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 37 381 - -
Dod06g0728 389 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 37 381 IPR005333 GO:0003700
Dod06g0728 389 MobiDBLite consensus disorder prediction 372 389 - -
Dod06g0728 389 ProSiteProfiles TCP domain profile. 90 144 IPR017887 -
Dod06g0728 389 MobiDBLite consensus disorder prediction 369 389 - -
Dod06g0728 389 MobiDBLite consensus disorder prediction 301 352 - -
Dod06g0728 389 MobiDBLite consensus disorder prediction 297 352 - -
Dod06g0728 389 Pfam TCP family transcription factor 90 175 IPR017887 -
Dod06g0728 389 MobiDBLite consensus disorder prediction 52 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0728 Dod-Chr6 8794927 8796974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0728 83 370 TCP Transcription Factor Family AT5G51910 48.980 4.26e-75 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Dod06g0728 TCP 1.8e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0728 - - ahf:112711692 362.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0728 06 8794927 8796974 Dod06g0728 06 8794927 8796974 ECH