Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0711 ATGAATCCTTTACACCCGTTCCCAAGTGATGATCAGTTATACTCTCAGATTTCATCTGCTAACTATACCCTACCGATCCAAACAGCGGCCCCAGAAGATCAGATCTTGCTTGATCCTATGATGGATGGCGGTGTTGTACCACCTCGTACAAATCAAAGAGGAAAGGGGAAGCAGCGAAAACAGTTACCTACTTCGGGAGCAGAAGATTATAATCAGATGGACAATGAAAACAAGAAGTGGATGCATAGGGAGATAGAAAAACAAAGAAGGCAAGAAATGTCCAGACTTTGCACCACCTTTAGATCTCTTCTGCCTATTGAATATCTTAAGGGAAAGCGCTCAACTTCTGATCACATGCATGAGGGTGTGAATTATATCAAATACCTACAGAATAAGGTGCAGCAATTGCAAGCCAAGAGGGATGAGTTAATGAAGTTGTCTAGTCTGAGTCGTGTTGTCCCTGAGAGTGGAAGCTTTAATACGCATGATCTTCCAACCTATGTCACTGTGGAGCCTTTTTCTGGAGGGATTCAGATTAAGTGTAGTTATAGCTTCAGGAATTATGCGCTTCCCTTATCAAGAGTGCTGGACATAGTGCTTAAAGAAGGGCTTAATTTGGTCAATTGTACTTCCATTAAGACAGATGACAGGTTCATACACACTATCCGATCAGAGGATCCACAAATGAGGACTGAGACTGATTACACTGAACTGCAAAGAAAGATTGCCGAAGCAATATCATCTTCAAGTAATATCGTCCTGTTTGCTGGCGGAGGCCTGTCTCTGAACCTGACAACTGATCGATATCTTAATAATAGTGTGTAG 825 0.4218 MNPLHPFPSDDQLYSQISSANYTLPIQTAAPEDQILLDPMMDGGVVPPRTNQRGKGKQRKQLPTSGAEDYNQMDNENKKWMHREIEKQRRQEMSRLCTTFRSLLPIEYLKGKRSTSDHMHEGVNYIKYLQNKVQQLQAKRDELMKLSSLSRVVPESGSFNTHDLPTYVTVEPFSGGIQIKCSYSFRNYALPLSRVLDIVLKEGLNLVNCTSIKTDDRFIHTIRSEDPQMRTETDYTELQRKIAEAISSSSNIVLFAGGGLSLNLTTDRYLNNSV* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0711 274 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 77 129 IPR011598 GO:0046983
Dod06g0711 274 PANTHER TRANSCRIPTION FACTOR 68 254 - -
Dod06g0711 274 Coils Coil 126 146 - -
Dod06g0711 274 MobiDBLite consensus disorder prediction 38 72 - -
Dod06g0711 274 Pfam Helix-loop-helix DNA-binding domain 79 130 IPR011598 GO:0046983
Dod06g0711 274 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 68 254 IPR015660 GO:0003700|GO:0006357
Dod06g0711 274 CDD bHLH_AtORG2_like 78 151 - -
Dod06g0711 274 Gene3D - 68 154 IPR036638 GO:0046983
Dod06g0711 274 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 76 148 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0711 Dod-Chr6 8582234 8583518 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0711 74 242 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 40.805 8.56e-36 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dod06g0711 HLH 9.3e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0711 - - gmx:100803786 314.309