Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0710 ATGGCCGAAGAGAATCAGCATATAATCTTGCCCACCTCCGACAATGATGAGAGGAAGATCATTCGCAGGGAAGTGGAAAGAAAAAGGAGGACTCATATGTCTACTTTGTGTGCATCACTCCGCTCTTCACTCCCTTTTGAACTCATCAAGGGGAAGCGTTCGGTATCTGATCACATAGGCGAGGCTTCAAATTATGTCCAATTTTTGAAGGAGAAGATTGATGCGCTCCAAATCAAGAGAGATAGGCTGAAACAGGTGGTGGTCGATCCAAGTTTGCTTGAAACTGGAACTGAATGTCCCAGTCATTCAAGTGCACACGACAAGTGTGTCAACATCAACCCCGTCCCAGGTGGCTTGGAAATTGACATAAGCAGTGGCTTGGAGGAGTGCGGTTCACCTCTATCAGACTTGATGGAAATATTGCTTCAAGAAGGATGTGATGTTGTTAGCTGTGTGTCCACCCAAGTAAATGGGAAGACACTTCATACTCTTAAGTGTGAGGTGGAGGACTTGACAAGCCTTGATCTTGCTAGGCTACGGCACAAACTGAATCATGCAATCTTGTTTCATGGTAATTATTCCAGTTGA 588 0.4507 MAEENQHIILPTSDNDERKIIRREVERKRRTHMSTLCASLRSSLPFELIKGKRSVSDHIGEASNYVQFLKEKIDALQIKRDRLKQVVVDPSLLETGTECPSHSSAHDKCVNINPVPGGLEIDISSGLEECGSPLSDLMEILLQEGCDVVSCVSTQVNGKTLHTLKCEVEDLTSLDLARLRHKLNHAILFHGNYSS* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0710 195 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 12 190 IPR015660 GO:0003700|GO:0006357
Dod06g0710 195 Coils Coil 66 86 - -
Dod06g0710 195 Gene3D - 11 86 IPR036638 GO:0046983
Dod06g0710 195 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 12 190 - -
Dod06g0710 195 Pfam Helix-loop-helix DNA-binding domain 21 69 IPR011598 GO:0046983
Dod06g0710 195 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 17 69 IPR011598 GO:0046983
Dod06g0710 195 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 16 87 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0710 Dod-Chr6 8563213 8564960 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0710 17 168 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51790 36.774 3.56e-29 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dod06g0710 HLH 0.00016 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0710 - - gmx:100776724 256.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0710 06 8563213 8564960 Dod06g0710 06 8563213 8564960 ECH