Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0709 ATGGAGGAATATTTGCCATCATATGATAACTACGGCCCCCCTTCACCCACCCTATCAAACTTACATGTACCTGCTGCTGCTACATTAAACTCCATACCCAAAAATATTGGGGACGATAATTTGGAACATTCGTCGTGGAGCCGACCAGACATGTTGCTTCCTTTACAACGGGGCAATGAGCTGGTGATTCAGTTCTCTGATTGTGTCAACCAACACAAGATCTCCCAACATCATCACCAGATCCTGAATGATGATTGTGATTCTCCGGTTGTCGGTTACATATCTCCTGAAAAATTGGCTTCCAGTACCGGGTCGAAGAAAATATTTTATGGGGCTGCAGGTAGTGCGAGTCATGCTGATCCTAATATCCAACATAAGGAGAAGAAAATGGTCCATAGGGAGATTGAAAGGCAAAGGAGAAAAGATATGGCCACCCTTCATGCTTCCCTTAGATCCCTTCTGCCTCTTGAGTTTATCAAGGGAAAGCGTTCGGTATCGGATCAAATGAACGAGGCAGTACACTACATAAAGCAGATGCAGAAGAATATCAAAGAACTGAGTGTCAAGAGGGATGAACTCAAGAAACTCTCCAATTCAGAGCTTGGAGAAAATTACCATGAGGATGAAATGAACAAGCATGCTTCTAGCGGTACTTTCACTGTCCACCAGAACAATAATGGAGCTCTGGGAATTGAAATTACTAGTGGCTTCAGAGAGGAAGAAGGGGTCCCACTTTCAAAGTTGCTGGAGCTGCTGTTTCAAGAGGGACTTGAAGTTGTTACTTGCCTTTCAACTGAAGTCAATGGAAGATTACTCCACAGTCTGCACTGTGAGGTAAAAAATTCCAACCGTGTAGATCTATCTGAGCTGAGAAGGAAATTTGTCAGGGTGATTCCATCGTTTAGGTGTTCTAATTAA 918 0.4336 MEEYLPSYDNYGPPSPTLSNLHVPAAATLNSIPKNIGDDNLEHSSWSRPDMLLPLQRGNELVIQFSDCVNQHKISQHHHQILNDDCDSPVVGYISPEKLASSTGSKKIFYGAAGSASHADPNIQHKEKKMVHREIERQRRKDMATLHASLRSLLPLEFIKGKRSVSDQMNEAVHYIKQMQKNIKELSVKRDELKKLSNSELGENYHEDEMNKHASSGTFTVHQNNNGALGIEITSGFREEEGVPLSKLLELLFQEGLEVVTCLSTEVNGRLLHSLHCEVKNSNRVDLSELRRKFVRVIPSFRCSN* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0709 305 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 55 303 IPR015660 GO:0003700|GO:0006357
Dod06g0709 305 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 55 303 - -
Dod06g0709 305 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 126 194 IPR036638 GO:0046983
Dod06g0709 305 Coils Coil 176 196 - -
Dod06g0709 305 Gene3D - 120 209 IPR036638 GO:0046983
Dod06g0709 305 SMART finulus 133 185 IPR011598 GO:0046983
Dod06g0709 305 Pfam Helix-loop-helix DNA-binding domain 128 180 IPR011598 GO:0046983
Dod06g0709 305 CDD bHLH_AtORG2_like 128 204 - -
Dod06g0709 305 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 127 179 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0709 Dod-Chr6 8546553 8548158 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0709 128 297 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 45.714 4.48e-37 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dod06g0709 HLH 7.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0709 - - gmx:100775836 287.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3135 02 66287663 66289252 Dod06g0709 06 8546553 8548158 PCT