Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod06g0709 | ATGGAGGAATATTTGCCATCATATGATAACTACGGCCCCCCTTCACCCACCCTATCAAACTTACATGTACCTGCTGCTGCTACATTAAACTCCATACCCAAAAATATTGGGGACGATAATTTGGAACATTCGTCGTGGAGCCGACCAGACATGTTGCTTCCTTTACAACGGGGCAATGAGCTGGTGATTCAGTTCTCTGATTGTGTCAACCAACACAAGATCTCCCAACATCATCACCAGATCCTGAATGATGATTGTGATTCTCCGGTTGTCGGTTACATATCTCCTGAAAAATTGGCTTCCAGTACCGGGTCGAAGAAAATATTTTATGGGGCTGCAGGTAGTGCGAGTCATGCTGATCCTAATATCCAACATAAGGAGAAGAAAATGGTCCATAGGGAGATTGAAAGGCAAAGGAGAAAAGATATGGCCACCCTTCATGCTTCCCTTAGATCCCTTCTGCCTCTTGAGTTTATCAAGGGAAAGCGTTCGGTATCGGATCAAATGAACGAGGCAGTACACTACATAAAGCAGATGCAGAAGAATATCAAAGAACTGAGTGTCAAGAGGGATGAACTCAAGAAACTCTCCAATTCAGAGCTTGGAGAAAATTACCATGAGGATGAAATGAACAAGCATGCTTCTAGCGGTACTTTCACTGTCCACCAGAACAATAATGGAGCTCTGGGAATTGAAATTACTAGTGGCTTCAGAGAGGAAGAAGGGGTCCCACTTTCAAAGTTGCTGGAGCTGCTGTTTCAAGAGGGACTTGAAGTTGTTACTTGCCTTTCAACTGAAGTCAATGGAAGATTACTCCACAGTCTGCACTGTGAGGTAAAAAATTCCAACCGTGTAGATCTATCTGAGCTGAGAAGGAAATTTGTCAGGGTGATTCCATCGTTTAGGTGTTCTAATTAA | 918 | 0.4336 | MEEYLPSYDNYGPPSPTLSNLHVPAAATLNSIPKNIGDDNLEHSSWSRPDMLLPLQRGNELVIQFSDCVNQHKISQHHHQILNDDCDSPVVGYISPEKLASSTGSKKIFYGAAGSASHADPNIQHKEKKMVHREIERQRRKDMATLHASLRSLLPLEFIKGKRSVSDQMNEAVHYIKQMQKNIKELSVKRDELKKLSNSELGENYHEDEMNKHASSGTFTVHQNNNGALGIEITSGFREEEGVPLSKLLELLFQEGLEVVTCLSTEVNGRLLHSLHCEVKNSNRVDLSELRRKFVRVIPSFRCSN* | 306 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod06g0709 | 305 | PANTHER | ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED | 55 | 303 | IPR015660 | GO:0003700|GO:0006357 | |
Dod06g0709 | 305 | PANTHER | TRANSCRIPTION FACTOR BHLH FAMILY-RELATED | 55 | 303 | - | - | |
Dod06g0709 | 305 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 126 | 194 | IPR036638 | GO:0046983 | |
Dod06g0709 | 305 | Coils | Coil | 176 | 196 | - | - | |
Dod06g0709 | 305 | Gene3D | - | 120 | 209 | IPR036638 | GO:0046983 | |
Dod06g0709 | 305 | SMART | finulus | 133 | 185 | IPR011598 | GO:0046983 | |
Dod06g0709 | 305 | Pfam | Helix-loop-helix DNA-binding domain | 128 | 180 | IPR011598 | GO:0046983 | |
Dod06g0709 | 305 | CDD | bHLH_AtORG2_like | 128 | 204 | - | - | |
Dod06g0709 | 305 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 127 | 179 | IPR011598 | GO:0046983 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod06g0709 | Dod-Chr6 | 8546553 | 8548158 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod06g0709 | 128 | 297 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT5G51780 | 45.714 | 4.48e-37 | 129 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bHLH | Dod06g0709 | HLH | 7.1e-09 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod06g0709 | - | - | gmx:100775836 | 287.73 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dod02g3135 | 02 | 66287663 | 66289252 | Dod06g0709 | 06 | 8546553 | 8548158 | PCT |