Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0706 ATGTCATGCCCACATGTGAGTGGCATTGCTGCATTGCTCAAGGCTAGGCATCCAGAATGGAGACCAGCTGCCATAAAATCTGCACTGATGACAACAGCTTATGTTCATGACAACACCATCAAGCCTCTAAGAGATGCCGCAACTGCTGAACCATCAACTCCTTATGATCATGGTGCTGGACACATTAACCCCACAAAGGCCCTTGACCCAGGTTTGGTCTATGACATTGGACCACAGGATTACTTTGAGTTCCTGTGCACACAGAATCTAACCCCAGCCCAACTGGGAGTTTTTGCCAAATACTCAAACAGAACTTGCAGGCACTCTCTTGCAAGTCCCGGGGACTTGAACTACCCAGCCATATCAGTGGTGTTTCCAGAGAAAGCAACTGTTTCATCATTGACAGTTCACAGAACTGCCACCAATGTAGGCCCTCCTGTTTCAAAATACCATGTTATGGTGTCACCATTTAAAGGTGCTTCTGTCAAAGTTGAGCCAGATTCCTTGAATTTCACAAGAAAGTACCAGAAACTGTCATACAAGGTTACCCTCACAACAAAATCTCGGCAAACAGAACCTGAATTTGGAGGCCTTGTGTGGAAGGATGGTGTGCACAGGGTAAGAAGCCCGATTGTGATAACGTATCTGCCACCAGTGTAA 660 0.4636 MSCPHVSGIAALLKARHPEWRPAAIKSALMTTAYVHDNTIKPLRDAATAEPSTPYDHGAGHINPTKALDPGLVYDIGPQDYFEFLCTQNLTPAQLGVFAKYSNRTCRHSLASPGDLNYPAISVVFPEKATVSSLTVHRTATNVGPPVSKYHVMVSPFKGASVKVEPDSLNFTRKYQKLSYKVTLTTKSRQTEPEFGGLVWKDGVHRVRSPIVITYLPPV* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0706 219 Pfam Fibronectin type-III domain 115 213 IPR041469 -
Dod06g0706 219 Gene3D - 85 216 - -
Dod06g0706 219 Gene3D Peptidase S8/S53 domain 1 81 IPR036852 GO:0004252|GO:0006508
Dod06g0706 219 Pfam Subtilase family 1 40 IPR000209 GO:0006508|GO:0008236
Dod06g0706 219 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 215 IPR045051 -
Dod06g0706 219 SUPERFAMILY Subtilisin-like 1 74 IPR036852 GO:0004252|GO:0006508
Dod06g0706 219 ProSiteProfiles Serine proteases, subtilase domain profile. 1 68 - -
Dod06g0706 219 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.1 1 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0706 Dod-Chr6 8525744 8526403 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0706 1 219 Subtilisin-like Serine Gene Family AT5G51750 70.000 1.75e-112 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0706 - - gmx:102661592 403.29