Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0699 ATGGCAATTGCAGCAACTTCAACCATCTCTCTTCTCCTCTTTCTTCTTAATCTTTGCCTTAAGGGCACTTATGGTGACTATGGAGGTGGATGGCAAGGTGGTCATGCCACATTTTATGGTGGCGGAGATGCATCTGGCACAATGGGAGGGGCTTGTGGTTATGGAAACTTGAACAGCCAAGGCTATGGCACTAACACTGCAGCACTCAGCACTGCTCTATTCAACAATGGCTTGAGCTGCGGGTCTTGCTACGAGATGAAGTGTGACGCTGACCCCAAATGGTGCCTCCCTGGCACCATCACAGTCACTGCCACAAACTTCTGCCCTCCAAACAATGCCTTGTCCAATGACAATGGTGGTTGGTGCAACCCGCCCCTTCAGCACTTCGATCTTGCTGAACCTGCTTTCCTACAAATTGCTCAATACAAAGCTGGAATTGTTCCTGTTTCCTTCAGAAGAGTCCCATGTGCCAAGAAAGGAGGAATAAAGTTCACAATCAATGGTCACTCTTACTTCAACCTGGTGCTGATCTCAAATGTTGCTGGAGCAGGAGATGTTCACTCTGTGTCCATCAAAGGGTCCAAGACAGGGTGGCAAACCATGTCAAGAAACTGGGGCCAGAACTGGCAGAGCAACTCTTACCTCAATGGCCAGAGCCTCTCCTTCCAGGTCACCACCAGTGATGGCCGGACCATCATTAGCAACAATATACATCTACCATTTGATCATCGCCATGTGATGCAGTGTGGTGATGGCAAGGTAGAAAATGTTAGTAAAGTACAGACAGTTCTTTTCAGCTCTGCTTTGCCAGACTGGGTTAAGCATGTATGCCTCTATGTGATATGTACCAATTCACATTTAGCTCCTATAACCCTATCCAATGTCTATTCTTGCCAGATTGCTGCAAAATTTTTGAAGGCAAATAAGAAAAATGTTGACCTTGTTGGAAATACAAAAAAGAAGGCCAGCACCAATGTTAAGCATATTGTTCTTCCCTGTAGTAGTTCTGCCAGGCCCCAGTTTATCCCAGACATTATTCGCTATTATAGTAGTGGAGGCCACACAATCATATTGATCGAGTCAAAGGAGTCTGCATCACAACTTGCAAGTTTGTTGCCTGGGGCAAGAGCTCTCCGTGGTGACATACAGAAGGCACAATGTGAGGTTACATTGTCTGGCTTCAGGTCTGGAAAACTCATGACATGA 1206 0.4627 MAIAATSTISLLLFLLNLCLKGTYGDYGGGWQGGHATFYGGGDASGTMGGACGYGNLNSQGYGTNTAALSTALFNNGLSCGSCYEMKCDADPKWCLPGTITVTATNFCPPNNALSNDNGGWCNPPLQHFDLAEPAFLQIAQYKAGIVPVSFRRVPCAKKGGIKFTINGHSYFNLVLISNVAGAGDVHSVSIKGSKTGWQTMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTIISNNIHLPFDHRHVMQCGDGKVENVSKVQTVLFSSALPDWVKHVCLYVICTNSHLAPITLSNVYSCQIAAKFLKANKKNVDLVGNTKKKASTNVKHIVLPCSSSARPQFIPDIIRYYSSGGHTIILIESKESASQLASLLPGARALRGDIQKAQCEVTLSGFRSGKLMT* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0699 401 Gene3D - 308 400 IPR027417 -
Dod06g0699 401 Gene3D - 21 157 IPR036908 -
Dod06g0699 401 PRINTS Expansin/Lol pI family signature 30 45 IPR007118 GO:0005576
Dod06g0699 401 PRINTS Expansin/Lol pI family signature 70 88 IPR007118 GO:0005576
Dod06g0699 401 PRINTS Expansin/Lol pI family signature 198 212 IPR007118 GO:0005576
Dod06g0699 401 PRINTS Expansin/Lol pI family signature 48 66 IPR007118 GO:0005576
Dod06g0699 401 PRINTS Expansin/Lol pI family signature 144 160 IPR007118 GO:0005576
Dod06g0699 401 Pfam Expansin C-terminal domain 162 237 IPR007117 -
Dod06g0699 401 Gene3D - 159 250 IPR036749 -
Dod06g0699 401 SUPERFAMILY Barwin-like endoglucanases 12 179 IPR036908 -
Dod06g0699 401 SMART dpbb_1 66 151 IPR007112 -
Dod06g0699 401 SUPERFAMILY PHL pollen allergen 158 237 IPR036749 -
Dod06g0699 401 Pfam Lytic transglycolase 66 151 IPR009009 -
Dod06g0699 401 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 171 237 IPR007117 -
Dod06g0699 401 PRINTS Expansin signature 160 172 IPR002963 GO:0009664
Dod06g0699 401 PRINTS Expansin signature 88 99 IPR002963 GO:0009664
Dod06g0699 401 PRINTS Expansin signature 136 149 IPR002963 GO:0009664
Dod06g0699 401 PRINTS Expansin signature 100 110 IPR002963 GO:0009664
Dod06g0699 401 PRINTS Expansin signature 207 228 IPR002963 GO:0009664
Dod06g0699 401 PRINTS Expansin signature 61 75 IPR002963 GO:0009664
Dod06g0699 401 PRINTS Expansin signature 172 193 IPR002963 GO:0009664
Dod06g0699 401 PRINTS Expansin signature 119 136 IPR002963 GO:0009664
Dod06g0699 401 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 49 161 IPR007112 -
Dod06g0699 401 PANTHER EXPANSIN-A15 5 237 IPR002963 GO:0009664
Dod06g0699 401 PANTHER EXPANSIN 5 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0699 Dod-Chr6 8463080 8466813 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0699 10 237 Expansin Gene Family AT2G40610 83.406 8.75e-140 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0699 - K20628 gmx:100807183 438.343