Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0696 ATGCTCCATCGCCTCTGCCCTCCCGTTGTGCAGTGCGCCCTTGCTTCTCACACTGTCCTACCAACTTCTCCGCGTGAAGCGCCTCTGCTTCGCCCCTGCTTCTTTGTGCTTTGGCCACTGCTCCGCCCTCACTTCTTTGCGCGTCGGCCTCTGCTTCGCCCTCGCTTCTCTTCGCGGCCTCTACTTCGCCATTCCTCCTTCGTGCTGCCCCCACCTGATAGTGATAAGTATTACATTGTCATTCCCTTTGTCATAATCTTTAATTCTTTACTGATTGGGCACCTTACATACAGTTTAGCGATTAGGCACTTTTTAGTTTGTATTGTTGCTAACTTGCTGCTGATGCACCGTGATATTAGGGAAAATGGCACTTATGGTGACTATGGAGGTGGATGGCAAGGTGGTCATGCCACATTTTATGGTGGCGGAGATGCATCTGGCACAATGGGAGGGGCTTGTGGTTATGGAAACTTGAACAGCCAAGGCTATGGCACTAACACTGCAGCACTCAGCACTGCTCTATTCAACAATGGCTTGAGCTGCGGGTCTTGCTACGAGATGAAGTGTGACGCTGACCCCCAATGGTGCCTCCCTGGCACCATCACAGTCACTGCCACAAACTTCTGCCCTCCAAACAATGCCTTGTCCAATGACAATGGTGGTTGGTGCAACCCGCCCCTTCAGCACTTCGATCTTGCTGAGCCTGCTTTCCTACAAATTGCTCAATACAAGGCTGGAATTGTTCCTGTTTCCTTCAGAAGAGTCCCATGTGCCAAGAAAGGAGGAATAAAGTTCACAATCAATGGTCACTCTTACTTCAATCTGGTGCTGATCTCAAATGTTGCTGGAGCAGGAGATGTTCACTCTGTGTCCATCAAAGGGTCCAAGACAGGGTGGCAAACCATGTCAAGAAACTGGGGCCAGAACTGGCAGAGCAACTCTTACCTCAATGGCCAGAGCCTCTCCTTCCAGGTCACCACCAGTGATGGCCGGACCATCATTAGCAACAATGTTGCACCTGCTAATTGGCAATTTGGACAGACATTTGAGGGGTCACAGTTTTAG 1065 0.5042 MLHRLCPPVVQCALASHTVLPTSPREAPLLRPCFFVLWPLLRPHFFARRPLLRPRFSSRPLLRHSSFVLPPPDSDKYYIVIPFVIIFNSLLIGHLTYSLAIRHFLVCIVANLLLMHRDIRENGTYGDYGGGWQGGHATFYGGGDASGTMGGACGYGNLNSQGYGTNTAALSTALFNNGLSCGSCYEMKCDADPQWCLPGTITVTATNFCPPNNALSNDNGGWCNPPLQHFDLAEPAFLQIAQYKAGIVPVSFRRVPCAKKGGIKFTINGHSYFNLVLISNVAGAGDVHSVSIKGSKTGWQTMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTIISNNVAPANWQFGQTFEGSQF* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0696 354 PANTHER EXPANSIN 112 354 - -
Dod06g0696 354 Gene3D - 120 258 IPR036908 -
Dod06g0696 354 Pfam Expansin C-terminal domain 263 340 IPR007117 -
Dod06g0696 354 PRINTS Expansin signature 189 200 IPR002963 GO:0009664
Dod06g0696 354 PRINTS Expansin signature 261 273 IPR002963 GO:0009664
Dod06g0696 354 PRINTS Expansin signature 220 237 IPR002963 GO:0009664
Dod06g0696 354 PRINTS Expansin signature 337 353 IPR002963 GO:0009664
Dod06g0696 354 PRINTS Expansin signature 308 329 IPR002963 GO:0009664
Dod06g0696 354 PRINTS Expansin signature 162 176 IPR002963 GO:0009664
Dod06g0696 354 PRINTS Expansin signature 201 211 IPR002963 GO:0009664
Dod06g0696 354 PRINTS Expansin signature 237 250 IPR002963 GO:0009664
Dod06g0696 354 PRINTS Expansin signature 273 294 IPR002963 GO:0009664
Dod06g0696 354 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 272 351 IPR007117 -
Dod06g0696 354 SUPERFAMILY PHL pollen allergen 259 351 IPR036749 -
Dod06g0696 354 Pfam Lytic transglycolase 167 252 IPR009009 -
Dod06g0696 354 PANTHER EXPANSIN-A15 112 354 IPR002963 GO:0009664
Dod06g0696 354 Gene3D - 260 354 IPR036749 -
Dod06g0696 354 SUPERFAMILY Barwin-like endoglucanases 106 280 IPR036908 -
Dod06g0696 354 SMART dpbb_1 167 252 IPR007112 -
Dod06g0696 354 PRINTS Expansin/Lol pI family signature 131 146 IPR007118 GO:0005576
Dod06g0696 354 PRINTS Expansin/Lol pI family signature 149 167 IPR007118 GO:0005576
Dod06g0696 354 PRINTS Expansin/Lol pI family signature 245 261 IPR007118 GO:0005576
Dod06g0696 354 PRINTS Expansin/Lol pI family signature 299 313 IPR007118 GO:0005576
Dod06g0696 354 PRINTS Expansin/Lol pI family signature 337 351 IPR007118 GO:0005576
Dod06g0696 354 PRINTS Expansin/Lol pI family signature 171 189 IPR007118 GO:0005576
Dod06g0696 354 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 150 262 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0696 Dod-Chr6 8439237 8442589 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0696 101 354 Expansin Gene Family AT2G40610 80.000 1.04e-148 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0696 - K20628 gmx:100807183 454.521