Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0687 ATGCCAGTGAGGCAGATGAAGGAGAGCTCAGACCAACACCTTGTGATCAAACCCCATTTGCAGAACCCCATGAATCCATCCAAGGCACCAAAAGCTGTCCAAAATGGGAAGGGTCCACCTCCACAAGAGAACCACAACAACCAAGCTTCACCTCAGTCAAGGAACAAGGGAAGAAGAAGGGGCAGAGGTGGCAAAAAATCTGATCAAGGAGATGTTTTGATGAGGCCCAGTTGCAGGCCTTGTACTGTCACAAATGCTGCAAATGGGAATGTTGAAAATGGAAGCATCTCTGGTGACACAGACATGGGTTTTCCCACTTCAAGCAAGTCCTTGAGCTTTGCTCGCAGGCCTGGTTATGGACAAGTTGGGACAAAATGCATTGTGAAGGCTAACCACTTCTTTGCTGAGTTACCAGACAAGGACTTGAACCAGTATGATGTTACTATTACCCCGGAAGTGTCTTCGAGAACAGTAAACAGGTCCATCATAGCAGAACTTGTGAGGCTGTATAAAGAGTCTGACTTGGCGATGAGACTTCCAGCATATGATGGCAGGAAAAGTCTGTACACAGCAGGCCAGCTTCCCTTTGCCTGGAGAGAGTTTAAGATAAAGCTTGTGGATGATGAGGATGGTGTTAATGGCCCCAAGAGGGAAAGAGAATACAGGGTGGTGATCAAGTTTGTTGCTCAGGCAAACTTGCATCACTTGGGCCAGTTTCTAGCTGGTAAGCGCGCTGATGGACCACAGGAGGCACTTCAAATCCTTGACATTGTGCTGAGAGAGCTATCAACTAGGAGGTACTGCCCCGTTGGGAGGTTCTTCTTTTCACCTGATATTAGAACACCACAACGGCTTGGAGAGGGATTGGAGTCATGGTGTGGGTTTTACCAGAGCATAAGGCCTACTCAGATGGGTCTTTCCCTCAATATTGATATGGCATCCGCTGCATTCATTGAGCCTCTTCCAGTAGTAGAATTTGTTGGCCAACAACTACTAGGAAAAGATGTGCTGTCAAGGCCATTGTCAGATGCTGATCGCATTAAGATTAAGAAAGCCCTTAGAGGAGTTAAGGTTGAAGTAACACACAGAGGAAGTGTAAGAAGAAAATATCGTGTTTCGGGCTTGACTTCTCAACCAACAAGAGAACTTGTGTTCCCTGTTGATGAGAACTCAACTATGAAGTCAGTGGTTGAATACTTCCAAGAGATGTATGGTTTCACTATTCAATATACTCACCTTCCTTGCCTTCAAGTAGGAAACCAAAAGAAGGCAAACTACTTACCTATGGAGGCCTGCAAAATTGTTGAGGGGCAACGTTATACGAAAAGATTGAATGAAAAGCAAATTACTGCTCTCCTCAAAGTTACTTGCCAGAGACCACGTGATCGGGAAAATGACATTTTACGGACTGTGCAACATAATGCTTATGATGAAGATCCTTATGCTAAGGAATTCGGGATTAAAATCAGTGAGAAGCTAGCTTCTGTTGAAGCACGAATTCTTCCTGCCCCTTGGCTTAAATACCACGAGAGTGGGAAAGAAAAGAACTGTTTACCCCAAGTTGGTCAGTGGAATATGATGAACAAGAAAATGATTAATGGAATGACTGTTAGCCGGTGGGCATGCATTAATTTTTCACGGAGTGTGCAAGATAGCGTTGCTCGCACCTTTTGTAATGAGCTTGCTCAAATGTGTCAAGTATCTGGCATGGAATTTAATCCAGAGCCTGTTATCCCCATCTACAATGCCAAGCCAGAGCTGGTGGAGAAAGCTCTGAAGCATGTTTACCATGTGTCAACCAACAAAACTAAAGGAAAAGAGTTGGAGCTTTTGTTAGCAATATTGCCTGACAACAATGGTTCTCTGTATGGTGATCTCAAGCGTATTTGTGAAACTGACCTTGGTTTAATTTCACAATGCTGTCTGACAAAGCACGTCTTTAAGATCACTAAACAGTACCTGGCTAATGTATCTTTGAAGATCAATGTTAAGATGGGAGGTAGAAACACTGTTCTTCTAGATGCTGTAAGCTGCAGAATACCGTTGGTTAGTGACATACCAACCATAATATTTGGAGCAGACGTTACTCACCCCGAAAATGGAGAAGATTCTAGCCCCTCAATAGCAGCTGTAGTAGCATCCCAGGACTGGCCTGAGGTGACAAAATATGCTGGTTTGGTGTGTGCTCAAGCTCATAGACAGGAACTTATACAAGATTTGTACAAAACTTGGCAGGACCCTGTTCGCGGCACAGTCAGTGGTGGCATGATCCGGGATTTGTTGATTTCTTTCAGAAAGGCAACGGGGCAGAAGCCACTAAGGATTATATTTTACAGGGATGGTGTAAGTGAAGGACAATTTTACCAAGTTCTACTTTATGAATTGGATGCGATCAGGAAGGCATGCGCTTCCTTAGAACCAAACTATCAGCCTCCAGTAACCTTCATAGTTGTACAAAAAAGACACCATACTCGGTTATTCGCAAACAACCACCGGGACAGGAGCAGTACTGATAAGAGTGGGAATATATTGCCTGGAACTGTTGTTGATTCTAAAATATGCCATCCAACGGAATTCGATTTTTACCTTTGCAGTCATGCTGGCATCCAGGGTACAAGTCGGCCAGCTCATTACCATGTTCTATGGGATGAAAACAACTTTACAGCAGATGGAATTCAGTCTTTGACAAACAATCTCTGTTATACATATGCCAGGTGTACGCGCTCCGTATCTGTTGTTCCTCCAGCATATTATGCACACTTAGCAGCCTTCCGAGCCCGGTTTTATATGGAACCGGATATGCAAGAGAATGGCTCCACTGGTGGTGGTAATGCTGGTCATGGTTCCAAGGGAACTCGAGCTGCAGGAGAGTGCGGTGTCAAGCCATTGCCAGCCGTGAAAGAAAATGTGAAGAGAGTAATGTTTTACTGTTAG 2934 0.4441 MPVRQMKESSDQHLVIKPHLQNPMNPSKAPKAVQNGKGPPPQENHNNQASPQSRNKGRRRGRGGKKSDQGDVLMRPSCRPCTVTNAANGNVENGSISGDTDMGFPTSSKSLSFARRPGYGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVSSRTVNRSIIAELVRLYKESDLAMRLPAYDGRKSLYTAGQLPFAWREFKIKLVDDEDGVNGPKREREYRVVIKFVAQANLHHLGQFLAGKRADGPQEALQILDIVLRELSTRRYCPVGRFFFSPDIRTPQRLGEGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVVEFVGQQLLGKDVLSRPLSDADRIKIKKALRGVKVEVTHRGSVRRKYRVSGLTSQPTRELVFPVDENSTMKSVVEYFQEMYGFTIQYTHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITALLKVTCQRPRDRENDILRTVQHNAYDEDPYAKEFGIKISEKLASVEARILPAPWLKYHESGKEKNCLPQVGQWNMMNKKMINGMTVSRWACINFSRSVQDSVARTFCNELAQMCQVSGMEFNPEPVIPIYNAKPELVEKALKHVYHVSTNKTKGKELELLLAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKITKQYLANVSLKINVKMGGRNTVLLDAVSCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWQDPVRGTVSGGMIRDLLISFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNHRDRSSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDMQENGSTGGGNAGHGSKGTRAAGECGVKPLPAVKENVKRVMFYC* 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0687 977 Gene3D paz domain 314 440 - -
Dod06g0687 977 ProSiteProfiles Piwi domain profile. 610 931 IPR003165 GO:0003676
Dod06g0687 977 PANTHER PROTEIN ARGONAUTE 10 55 976 - -
Dod06g0687 977 MobiDBLite consensus disorder prediction 1 102 - -
Dod06g0687 977 SUPERFAMILY PAZ domain 315 476 IPR036085 GO:0005515
Dod06g0687 977 Gene3D - 679 977 IPR036397 GO:0003676
Dod06g0687 977 ProSiteProfiles PAZ domain profile. 321 436 IPR003100 GO:0005515
Dod06g0687 977 Pfam Argonaute linker 2 domain 462 508 IPR032472 -
Dod06g0687 977 Gene3D - 500 673 - -
Dod06g0687 977 Pfam Piwi domain 611 930 IPR003165 GO:0003676
Dod06g0687 977 SMART PAZ_2_a_3 334 458 IPR003100 GO:0005515
Dod06g0687 977 CDD PAZ_argonaute_like 320 435 - -
Dod06g0687 977 MobiDBLite consensus disorder prediction 39 54 - -
Dod06g0687 977 MobiDBLite consensus disorder prediction 81 102 - -
Dod06g0687 977 CDD Piwi_ago-like 480 930 IPR045246 -
Dod06g0687 977 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 55 976 - -
Dod06g0687 977 Pfam PAZ domain 348 452 IPR003100 GO:0005515
Dod06g0687 977 Pfam N-terminal domain of argonaute 125 259 IPR032474 -
Dod06g0687 977 SMART DUF1785_2 268 320 IPR014811 -
Dod06g0687 977 Pfam Argonaute linker 1 domain 269 318 IPR014811 -
Dod06g0687 977 SUPERFAMILY Ribonuclease H-like 602 932 IPR012337 -
Dod06g0687 977 Pfam Mid domain of argonaute 519 596 IPR032473 -
Dod06g0687 977 SMART Piwi_a_2 610 931 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0687 Dod-Chr6 8285081 8294272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0687 1 977 Eukaryotic Initiation Factors Gene Family AT5G43810 81.356 0.0 1658
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0687 K11593 - gmx:100816999 1851.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0687 06 8285081 8294272 Dod06g0687 06 8285081 8294272 ECH