Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0686 ATGCAGCTCCCCCTCAACACCGAAGAACCTGCGCCCGAATCCCCCGAATTCCCCGAGAAACCCGAAGAGCCGAAGGCTCCGACCGGATCATCGGACTCCGGAACCGACGAATCCGTCGCACTCGACGTCACCGGGAAGAGCTTGGAGTTCCCGGCGCTGGAGAACGCTGGAGAAGACTCCTCCGCGGCGGAGAGCCTCTACCTCTACAAGAACGTTTACAGCTTGGTTCCGAAGTGGGTGGGTGGGCTCTCGAGGTTGAAGACGCTGAAGTTCTTCGGAAACGAGGTTAACTTGTTCGCACCCGAGTTTGCGAATTTGACGGGGTTGGAGTGCTTGCAGATGAAGATTTCTTCTCCAGGGATCGGTGGGTTGCCGCTGCATAAGCTGAAAGGGTTGAAGGAGCTCGAGCTTTCAAAAGGGCCTCCAAGGCCTTCGGCTTTTCCCTTATTGACTGAGATTGCTGCTCTCGAAAGATTGACCAAGCTTTCCGTTTGTCACTTCTCTATTAGATACCTTCCTCCGGAAATTGGATGCTTAAAGAATCTGGAGTATCTGGACCTATCATTCAATAAACTGAAGACGTTGCCTTCAGAGATTGGTTGTTTGAATGGGTTGATAACCATGAAAGCTGCGAATAATAAGTTGGTGGAACTACCGTCGGCTATGACTTCTCTGTCAAGGCTGGAGAGTCTGGACCTCTCAAACAATAGATTGACCTCGTTAGGATCCCTTGAACTTGGCTCAATGTGTAGACTTCGGATCTTAAATATTCAGTACAACAAGCTGCTCAGCTTTTTTCATATTCCTTCATGGATATGCTGTAACATGGAAGGGAATGATGGAAGTGGGTGCAATGATGATTGTAGCAGTTCTTCTGTTGAAATGGATGTCTACGAAAGCAGTTTACAGGAAAATAGTGATACCGTTTCTTATGGCCCTCATAATACCTCATCAAGCATATCAACTAACTCCTCTTCTAGCAGATGTTTTTCAGCCCGGAAGTCGGGTAAAAGGTGGAAACGGCAGTATTATTTGCAGCAGAAAGCTCGTCAAGAACGCTTGAATAACAGCAGGAAGTGGAAAATTGTAGATACTGATCAGTTATTGAGCAAGAAGATTCAATTTATCTCTGAATCTGGAAACCTGGCTCCTGAAAGTTGCAAAGAAACTGTATCAGACAATGTGAGCCTGGATGATAATAAGAAAAAAATATTCTCTGAAGAAGCAGTAAATGATAATCTAATTGATTCTGTCAATAATGATGAAGAAATTATTGAAAAGCAGTTTTCTAAAGAAGATTGCTGCACTGCTGAAAGTAAAAATGAAAAAGATGCATCCTTAAATGGAACCAGTGAACAGGATGAAGCATCTTGTTCAGAGAATTTGAAGTGTATTTCTAAATCAAAGAGGCATTCAGATCGGGATCTTGACAATCCTAAACCATGCAAGTCTAGAAAACCAGTTGGAGATGCCTCATTGTTGGCTCGCAAGTACAATAAATTTTCATTTTGTGGCATTGAGGACCATCTATCAGATGGCTTTTATGATGCAGGACGTGATAGGCCATTTATGCCTCTTGAGAGTTATGAGCAAAATCGATGTCTTGATTCTCGCGAGGTCATCCTATTAGACAGAAAAAAGGATGAAGAGTTGGATGCTGTTATGCTCTCTGCTCAGGCATTGGTCTTTAATTTGAAGCAGTTAAATGGCTTAAACAGATGTGGGATACAGGTTGTGGTTGATAACTTGCAGATAGCTTCACTGCTTGCACTCTTGGTATCCGATCATTTTGGTGGCAGTGATAGAGGTGATGTCGTAGTAAGAACACGTAAATCTGTGTCTGGTTCAAACTATAATAAGCCTTTTGTCTGTACTTGCTCAGCTGGAAGTAGCACCAGTATAAGTTCTTCCACTAAACCTGTTGTAAACACCATAGAAGATATCACTCTTCCTAGAATCTCTGAAAAATATATTCATTCTGTTAAGAAAAGGCGAAGTTCAGTCATAGTCCCAATTGGTTCTGTGCAGTATGGTGTATGTAGACATAGAGCCCTACTTTTGAAGTATTTATGTGATCACATGGAGCCACCAGTGCCTTGTGAGCTTGTCAGGGGTTACCTGGATTTTTCACCCCATGCATGGAATATCATTCTGATTAAAAGGGGTGCTACATGGGTTCGAATGCTGGTTGATGCCTGCCGACCTCATGATATAAGAGAAGAGAAAGATCCTGAATACTTTTGCAGGTATGTGCCTCTTAATCGAACCAAAATCCCTCTTTCATCTGGAGGAACTTCTGGTCTTGATTATTCCTTTCCATCTCTCTCTACTTGTGATAAACTTGAGAAAAAAGCTTCAACTACTTTAGTTCGGTGCAAAATTGGATCAGTTGAGGCTGCCGCAAAGGTGCGAACTTTAGAAGTGCAGGGTAGTTTAGCAGATGAAATTAAAAATTTTGAATATAATTGTTTGGGAGAAGTAAGAATTCTAGGTGCTTTGAAACACCCCTGCATAGTAGAAATGTATGGACATCAAATATCTTGCAAATGGACTTTCACTGCCGATGGTAATCCTGAGCAACGCATATTAAGATCTGCAATTTTTATGGAGTATGTGGAAGGTGGCTCCTTAAAAAACTACATAGAAAAGCTATCAGAAGCTGGTGAAAAGCATGTTCCCATGGAGTTGGCTTTGTATATTGCCAAAGATGTCTCTTGTGCTTTGTCGGAGCTGCACTCAAAACACATAATTCACCGTGACATAAAAAGTGAAAACATCCTGTTCGATTTAGATAGGAAGAGAGATGATGGAACTCCCACTGTGAAGCTCTGTGATTTTGACAGTGCAGTGCCACTAAGATCACCTTTGCATGCATGCTGTATTGCTCACATGGGAACACCTCCTCCTTGTGTATGTGTTGGAACACCTAGGTGGATGGCTCCAGAGGTTATGCGGACTATGTATGAAAAAAATGCTTATGGATTGGAAGCTGATATTTGGTCATTTGGATGTTTACTTCTGGAGATGCTGACTCTACAAATTCCATATTCTGGAGAATCTGATTCACTTGTCCATGACAATCTGCAGATGAGTAAGCGACCACGATTAACTGACAAGCTGGAGGCATTGAGTTCAATGACTGAACCCACAGTAAATCAATCTTGTGAAGAGCTGGAAAAATCAGAATCTGAGGTGGACATATTGAAATTCCTTGTTGATTTGTTTCATAGGTGTGTGGAAGAAAATCCTACTGACCGACCTTCAGCTGAAGAAATCCATGAAATGCTGCTTGCACGCACGGGCAGCCTAAGAGTTCAAGAAAGTAGGAATATTTAG 3336 0.4248 MQLPLNTEEPAPESPEFPEKPEEPKAPTGSSDSGTDESVALDVTGKSLEFPALENAGEDSSAAESLYLYKNVYSLVPKWVGGLSRLKTLKFFGNEVNLFAPEFANLTGLECLQMKISSPGIGGLPLHKLKGLKELELSKGPPRPSAFPLLTEIAALERLTKLSVCHFSIRYLPPEIGCLKNLEYLDLSFNKLKTLPSEIGCLNGLITMKAANNKLVELPSAMTSLSRLESLDLSNNRLTSLGSLELGSMCRLRILNIQYNKLLSFFHIPSWICCNMEGNDGSGCNDDCSSSSVEMDVYESSLQENSDTVSYGPHNTSSSISTNSSSSRCFSARKSGKRWKRQYYLQQKARQERLNNSRKWKIVDTDQLLSKKIQFISESGNLAPESCKETVSDNVSLDDNKKKIFSEEAVNDNLIDSVNNDEEIIEKQFSKEDCCTAESKNEKDASLNGTSEQDEASCSENLKCISKSKRHSDRDLDNPKPCKSRKPVGDASLLARKYNKFSFCGIEDHLSDGFYDAGRDRPFMPLESYEQNRCLDSREVILLDRKKDEELDAVMLSAQALVFNLKQLNGLNRCGIQVVVDNLQIASLLALLVSDHFGGSDRGDVVVRTRKSVSGSNYNKPFVCTCSAGSSTSISSSTKPVVNTIEDITLPRISEKYIHSVKKRRSSVIVPIGSVQYGVCRHRALLLKYLCDHMEPPVPCELVRGYLDFSPHAWNIILIKRGATWVRMLVDACRPHDIREEKDPEYFCRYVPLNRTKIPLSSGGTSGLDYSFPSLSTCDKLEKKASTTLVRCKIGSVEAAAKVRTLEVQGSLADEIKNFEYNCLGEVRILGALKHPCIVEMYGHQISCKWTFTADGNPEQRILRSAIFMEYVEGGSLKNYIEKLSEAGEKHVPMELALYIAKDVSCALSELHSKHIIHRDIKSENILFDLDRKRDDGTPTVKLCDFDSAVPLRSPLHACCIAHMGTPPPCVCVGTPRWMAPEVMRTMYEKNAYGLEADIWSFGCLLLEMLTLQIPYSGESDSLVHDNLQMSKRPRLTDKLEALSSMTEPTVNQSCEELEKSESEVDILKFLVDLFHRCVEENPTDRPSAEEIHEMLLARTGSLRVQESRNI* 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0686 1111 SMART LRR_sd22_2 179 201 - -
Dod06g0686 1111 SMART LRR_sd22_2 225 246 - -
Dod06g0686 1111 SMART LRR_bac_2 225 244 - -
Dod06g0686 1111 SMART LRR_bac_2 202 221 - -
Dod06g0686 1111 SMART LRR_bac_2 179 198 - -
Dod06g0686 1111 SMART LRR_typ_2 179 202 IPR003591 -
Dod06g0686 1111 SMART LRR_typ_2 249 275 IPR003591 -
Dod06g0686 1111 SMART LRR_typ_2 225 248 IPR003591 -
Dod06g0686 1111 PRINTS Leucine-rich repeat signature 182 195 - -
Dod06g0686 1111 PRINTS Leucine-rich repeat signature 225 238 - -
Dod06g0686 1111 MobiDBLite consensus disorder prediction 304 329 - -
Dod06g0686 1111 Gene3D Ribonuclease Inhibitor 39 299 IPR032675 -
Dod06g0686 1111 ProSiteProfiles Leucine-rich repeat profile. 227 248 IPR001611 GO:0005515
Dod06g0686 1111 SUPERFAMILY Protein kinase-like (PK-like) 790 1094 IPR011009 -
Dod06g0686 1111 PANTHER SERINE/THREONINE-PROTEIN KINASE SBK1 64 1102 - -
Dod06g0686 1111 Pfam Ethylene-responsive protein kinase Le-CTR1 654 731 - -
Dod06g0686 1111 SUPERFAMILY L domain-like 65 288 - -
Dod06g0686 1111 MobiDBLite consensus disorder prediction 1 41 - -
Dod06g0686 1111 SMART serkin_6 779 1098 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0686 1111 ProSiteProfiles Protein kinase domain profile. 775 1096 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0686 1111 ProSitePatterns Serine/Threonine protein kinases active-site signature. 916 928 IPR008271 GO:0004672|GO:0006468
Dod06g0686 1111 ProSiteProfiles Leucine-rich repeat profile. 181 202 IPR001611 GO:0005515
Dod06g0686 1111 PANTHER BNAC08G43810D PROTEIN 64 1102 - -
Dod06g0686 1111 Gene3D Transferase(Phosphotransferase) domain 1 779 1109 - -
Dod06g0686 1111 Pfam Protein kinase domain 816 1094 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0686 Dod-Chr6 8251440 8258121 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0686 827 1098 MAP Kinase Kinase Kinase AT2G24360 27.574 6.34e-22 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-2 Dod06g0686 Pkinase 3.8e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0686 - - gmx:100811118 1691.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0686 06 8251440 8258121 Dod06g0686 06 8251440 8258121 ECH