Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0680 ATGGTTTTGTTTGTGAATTACCGTGTGAGAGTTGCGAATTCTTGTTCTGTTTGCAGAAATGAGTATATTCTGGATAGTAGTGAAGGCACTACTAGGAGTGATGGTCCTGATATTGATACAAGTCAATGTGAAAGTGTGGCTAATAATGGTGGAATTGGTTCATCAGATTCTGAAACCATAAGAGCTTCTTCCAAGAACTTAAATTGTAATCATTCTAGAAGGTTTTCTTGCTTCAGGACAATCACCTCGCTTGCCCCCATTGCTTGCGTGGGAGTTTCTTCTTATTCTGCTTTGCAAGAGGTTGCCGGTGATTTCTTGTCCGGGCTACTTGAAGATCATGTGTTGAGTTCACTTGATCTCTGGATTGAAGGGAAAGCTTCAGGAACGGACAGCACGAATTTCCTTAGTTTAATTGGGTTGCCATCGTTTCAAGAAGATACTTTTCCGGGCTCCTTGAGGCATCCAAACATAGCTCCTGTTCTAGCATTTTTTAAATCATCTGATCATGTTAGCATGGTGCTCCCTAAGACTCCCTACAGTTTGGAAAGTATACTTCATTTTAACCCCAGCGCGTTAAAATCTGATTGGCATAGAAGGTTTCTTATTTATCAGCTGCTCTCAGCCTTATTGTACTTACATGGTTTAGGGGTTTCCCACGGCAATATATGCCCATCCAGTGTCATGTTGACTGACTCATTATGGTCTTGGCTGAGATTATGGGACGAATCTGTATTGGGATCTAGTTCAACTTTGCAAAAGAGTGAAACCGTCAAGTCTGATCCTGCAAAAATTGGTTGTTGTAGTAGTGGCTGTCTTTCTAATGGCCTTTATGCTGATCTAAAGCTTTCTCCATCAATAGATTGGCATTCTAGCTTTCATCAGTGGTGGAAAGGAGAACTAAGTAATTTTGAGTATTTACTCATCTTAAACAGATTAGCAGGAAGAAGGTGGGGGGACCATACATTTCATCCAGTCATGCCTTGGGTAATAGATTTTAGCACAAAACCCTGA 1011 0.4095 MVLFVNYRVRVANSCSVCRNEYILDSSEGTTRSDGPDIDTSQCESVANNGGIGSSDSETIRASSKNLNCNHSRRFSCFRTITSLAPIACVGVSSYSALQEVAGDFLSGLLEDHVLSSLDLWIEGKASGTDSTNFLSLIGLPSFQEDTFPGSLRHPNIAPVLAFFKSSDHVSMVLPKTPYSLESILHFNPSALKSDWHRRFLIYQLLSALLYLHGLGVSHGNICPSSVMLTDSLWSWLRLWDESVLGSSSTLQKSETVKSDPAKIGCCSSGCLSNGLYADLKLSPSIDWHSSFHQWWKGELSNFEYLLILNRLAGRRWGDHTFHPVMPWVIDFSTKP* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0680 336 CDD PKc 151 232 - -
Dod06g0680 336 Gene3D BEACH domain 289 336 IPR036372 -
Dod06g0680 336 Pfam Beige/BEACH domain 294 331 IPR000409 -
Dod06g0680 336 ProSiteProfiles BEACH domain profile. 280 336 IPR000409 -
Dod06g0680 336 Pfam Protein kinase domain 148 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0680 336 PANTHER GH12955P 47 336 - -
Dod06g0680 336 SUPERFAMILY Protein kinase-like (PK-like) 150 290 IPR011009 -
Dod06g0680 336 Gene3D Transferase(Phosphotransferase) domain 1 144 288 - -
Dod06g0680 336 ProSiteProfiles Protein kinase domain profile. 84 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0680 336 SUPERFAMILY BEACH domain 283 334 IPR036372 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0680 Dod-Chr6 8212754 8213764 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0680 153 233 Receptor kinase-like Gene Family AT5G05160 37.349 3.74e-06 46.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDKL-Cr Dod06g0680 Pkinase 1.3e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0680 K17601 - lja:Lj1g3v0112890.1 483.411