Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0664 ATGGCTGGTAGGCTACCTGGTGTTGGATTGTCACAAAGAAAGAGATCATCAGAACACAACCACCATAGATATGAACACCATGCCGCCCACCGAGCCTCCTACCTAAGGGAATCATTGGAGGAACCACCACCATGGATTTCGGTCACTGCCTTGGATGAGGCTACTCTCAGGGCCAGGCAACGCCTTCAGAAGAAGCTTGGACACTTCTTTTCCTCTAATTCCAGGGAAAGTGAGAATCCAAGAAAAGAAGGAACAGTGAGTGAAAGCACTAGGTTCCAGAAGAGGAATATAGGAATAGGTCGCAAGTTACTAGCAAGTTCATGGTTACTGCGTCCCATAAAGTATAAGAAAGAGAGAAAAGTGTGCGCCGTTTGCCTAGAAGATTTCCAGCAAGAGGAGCAGGTTATGAACCTTTCTTGCTCTCATAAGTACCATTCAACATGCCTCCTCCCCTGGCTTGCAGCACATCCCCATTGCCCCTATTGCCGAGCTCCAGTTGAACTCTGA 507 0.4793 MAGRLPGVGLSQRKRSSEHNHHRYEHHAAHRASYLRESLEEPPPWISVTALDEATLRARQRLQKKLGHFFSSNSRESENPRKEGTVSESTRFQKRNIGIGRKLLASSWLLRPIKYKKERKVCAVCLEDFQQEEQVMNLSCSHKYHSTCLLPWLAAHPHCPYCRAPVEL* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0664 168 Pfam Ring finger domain 121 163 IPR001841 -
Dod06g0664 168 ProSiteProfiles Zinc finger RING-type profile. 122 163 IPR001841 -
Dod06g0664 168 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 29 165 - -
Dod06g0664 168 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 29 165 - -
Dod06g0664 168 MobiDBLite consensus disorder prediction 75 89 - -
Dod06g0664 168 MobiDBLite consensus disorder prediction 68 90 - -
Dod06g0664 168 SUPERFAMILY RING/U-box 121 166 - -
Dod06g0664 168 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 106 167 IPR013083 -
Dod06g0664 168 CDD RING-H2_PA-TM-RING 121 163 - -
Dod06g0664 168 MobiDBLite consensus disorder prediction 1 29 - -
Dod06g0664 168 SMART ring_2 122 162 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0664 74 163 C3H Transcription Factor Family AT3G58720 35.556 2.23e-13 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0664 - - gmx:100527548 232.261