Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0660 ATGGCCTCTCATTCCGCCAAAAGGGGAGGCCCTTGTTATCTTGATACTGTTACCGTACCATTCCTGCTCTCATTCCTTCTCATTCTCATCTACATCAATCCTTCACACCAATCTGAATATCACTACTCCTCACCCGTCCCTGAGCTAAATCCAAGGCTCTCAAAAGCCTACACAGCTCTCCAAGCATGGAAGCACTCAATAACCTCTGACCCCAAGAACTTCACCTCCAATTGGTGTGGCCCCCATGTTTGCAACTACACTGGCATCTACTGTGCACCAGCACCGGATGACCCTCACATCTACACAGTGGCTGGAATAGACCTAAACCATGCCAACATAGCTGGTTCATTACCAGAAGAACTTGGCCTATTAACCGACCTTTCACTCTTCCACATAAACTCCAACCGCTTCTGTGGTTCCCTCCCAAACAGCTTCAGCTACCTTAAACTCCTCTTTGAGCTTGACATCAGCAACAACGATCTCTCAGGTCCATTTCCTGAGGTTGTTCTTTGCCTCCCTTCACTGAAATTCTTGGACATAAGATATAACAAGTTCCAAGGCAATGTTCCTTCACGCCTCTTTGACCTTAAACTCGATGCCCTTTTCATCAACAACAACAACTTCCAATTCTCCTTGCCTGAGAACTTTGGAAACATTCCAGCCTCGGTTATTGTGTTTGCAAACAATGACCTCAAGGGTTGTCTTCCATCATCGAGTTTTTTGAAAATGAAGGATACCCTTAACGAGATTATCATCACAAATAGTGGGTTGAAGGGTTGTTTGCCACCTGAAATAGGGTATCTGGACAAAGTCACGGTGTTTGATGTGAGCTTCAATGAGCTTGTTGGTGAATTGCCTGAATCCATGAGAGGGATGAAGAGCTTGGAGCAGTTGAATGTGGCGCATAACATGTTGTCTGGTACGATTCCGGAGAGTATATGCATGTTGCCGAGGTTGGAGAACTTCACATACTCGTATAACTACTTCTGTGATGAATCACCGGTGTGTCTGAAGCTGAAAGATAGTGATGATCGCAAGAACTGCTTTCCTTATAGGCCATTGCAAAGGACTGTTGATGAGTGTGCTGCCTTTTATGCACATCCTGTTGATTGTAGTGCCTTTGGCTGCTCCAGAACTGCACCGCCGCCTCCTCCTCCTCCACCACCACCACCACCTCCTCCCCCTCCACCACCACCACCACCGCCGCCACCACCTCCACCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCACCGCCACCGCCACCTCCTCCTCCTCCACCTCCACCTCCCGCAGTACCTTACTACCACTATCCCTGA 1317 0.4852 MASHSAKRGGPCYLDTVTVPFLLSFLLILIYINPSHQSEYHYSSPVPELNPRLSKAYTALQAWKHSITSDPKNFTSNWCGPHVCNYTGIYCAPAPDDPHIYTVAGIDLNHANIAGSLPEELGLLTDLSLFHINSNRFCGSLPNSFSYLKLLFELDISNNDLSGPFPEVVLCLPSLKFLDIRYNKFQGNVPSRLFDLKLDALFINNNNFQFSLPENFGNIPASVIVFANNDLKGCLPSSSFLKMKDTLNEIIITNSGLKGCLPPEIGYLDKVTVFDVSFNELVGELPESMRGMKSLEQLNVAHNMLSGTIPESICMLPRLENFTYSYNYFCDESPVCLKLKDSDDRKNCFPYRPLQRTVDECAAFYAHPVDCSAFGCSRTAPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPAVPYYHYP* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0660 438 MobiDBLite consensus disorder prediction 378 425 - -
Dod06g0660 438 Gene3D Ribonuclease Inhibitor 223 349 IPR032675 -
Dod06g0660 438 PRINTS Proline rich extensin signature 381 393 - -
Dod06g0660 438 PRINTS Proline rich extensin signature 393 414 - -
Dod06g0660 438 PRINTS Proline rich extensin signature 414 430 - -
Dod06g0660 438 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 25 388 - -
Dod06g0660 438 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 6 25 388 - -
Dod06g0660 438 Gene3D Ribonuclease Inhibitor 54 222 IPR032675 -
Dod06g0660 438 SUPERFAMILY L domain-like 56 335 - -
Dod06g0660 438 Pfam Leucine rich repeat N-terminal domain 57 91 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0660 Dod-Chr6 8015004 8016320 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0660 47 385 Leucine-rich Repeat extension Gene Families AT3G22800 68.732 4.42e-164 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0660 - - gmx:100818195 609.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0660 06 8015004 8016320 Dod06g0660 06 8015004 8016320 ECH