Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0657 ATGGATACACCAGACAGGAACCACGACAACAACAACAACAACAACGTCAACGCCCCTCTCGCCAGATTTGAGGATTCACCCGTATTTAACTATATCAATAGTTTGTCTCCTATACCCGTTAAGTCTGTTCACATTACCCAGACCTTCAACTCGCTTAGCTTTTCGTCCCCTCCATCTGTTTTCACGTCGCCTCATGTCAACTGTCACAAGGAATCCAGATTCCTGAAGAGGCATAACCATTTGGACACATCAAAGCCAAAGGCTTCATCTGAAGATGCAAATCAAACTCAATCAGGTGAAGATCTTACAGTTTCAACTCATACATGTCACGACTCAACTGAACTAGAGGAAAATGCTGATCAAGGGATTTCCATACGAGATGCCTCGATCGAGCTGCCACAGGCCTTAAAGTATAATTCTGGCAGCCCTGGATATGATCCCCTACTTTGTGTTGATGAGGCTAGTACTCTTCTGGAATTGCCTTCTGAGGCAGCACCGGATGTTGCCTATATTCAGGACGGCTCTAAAAAAGATGTAGTTGAGGCTGAATTGCATCTTCGGGGAATATGTCAGAGTGAGCCAAAAATTGCTGGCCCAGATTGTGATTGGGATAATTTAATGACTGATGCCTCTGATTTTTTAATTTTAAGTTCCCAAAATATGACAGAAGCTTTTAAGGGTCTAATGAATAAACCATTGGACCCTTTGGTGCACATTGTCAATCCAGTTGCTTCCGGATCAGCACATGAAAATGAAGATCATCCTCCTGAACCAATACCTGCCTCAGACACAGATCATACACAAGTCAATCTTGCCAATGTTGCTTTGGTGGATAGCAATCCAAGTGAGAAAATGGAAGATGAGCATGTTTATGTGATACACCGCGGTATACGGAGGCGCTGTCTAGACTTTGAGATGGCCAGTGTGCGAAGAAATAACATAGATGACACTCCCAACACCAGTTCTATTATAGCAAAGCCTGATGAGAGGGATATTGGTAATGAAAAGCAAATGCTTCCTACAAAACAAAGTGGTGATTCACAGAGGTGCTTTCTGCCGGGAATTGGTCTACACTTGAATGCACTTGCTACCTTAAAAGATCATGGAAGCATAAAAAGTGAAAAGTTGTCTTCTGGAAAACAACCTAACCTTCTCGGCTCCGCTTCTTCCTTGCCACCCTCTACAAGCCAAGAGCATCATCTGTCATTGGTACCCGTATCCTCTGAAAGAGATTTGGATCCATCAGAGAACGAGGTTCAGCCTGTTGAAGATTGTAGCCATTCATCAGCTTACATGGCTGGTGAAGATTTCCATCAGAATAGCCCTAAAAAGAAAAGGCGCAAGATGGAAACAGCCGGAGAAAGTGAGTCCTGCAAGCGGTGTAATTGTAAGAAATCAAAGTGTTTGAAGCTTTATTGTGAGTGCTTTGCTGCTGGAGTCTATTGTATAGAACCTTGCTCTTGTCAGGATTGCTTCAACAAGCCTATTCATGAAGATACTGTTCTTCAAACTCGCAAGCAGATTGAGTCTCGCAACCCACTTGCGTTTGCTCCTAAAGTCATCAGAAGTTCTGATTCTGTACCTGAAATTGGGGATGATCCAAACAAAACTCCAGCTTCAGCACGACACAAAAGAGGATGTAACTGCAAAAAATCAAGCTGCCTGAAGAAATATTGCGAATGTTACCAGGGTGGTGTCGGTTGCTCCATTAGCTGCAGATGCGAAGGGTGCAAGAACACATATGGTAGAAAGGATGGTACTGCTCCTACTGGAATAGAGGCCGAGGCCGAAGAAGAAACAGAAGCATGTGAAAAGGGTGTGGTGGAAAAAGCTTCACAGAAAACTGAAATTCAGAACTTTGAAGACAACCCAGATTCTGCTCTTCCCACAACCCCTTTAAGGATTTCCAGACCATTGCTTCCATTACCCTTCTCATCAAAGGGGAAGCCACCAAGATCTTTTGTTGCTACCATCTCTGCTTCTGGATTGTATGCCAGCCAAAAGCTTGGGAAACCAAATGCTATTCTGCCTCAAGCGAAATTCGAGAAGCCTCTTCTTCATACTGCTGCAGCTGATGAAATGATGGATGTTATCCGAGGTGATAGCTCTCCTATCACTTGCATCAAGACTTCTTCTCCCAATGGCAAACGGATCTCATCTCCAAATTGTGACTTTGGATCATCTCCTACTCGCAGAGGTGGCAGGAAGCTGATATTACAATCCATCCCTTCGTTTCCTTCTCTCACCCCTCACCATTAG 2259 0.4396 MDTPDRNHDNNNNNNVNAPLARFEDSPVFNYINSLSPIPVKSVHITQTFNSLSFSSPPSVFTSPHVNCHKESRFLKRHNHLDTSKPKASSEDANQTQSGEDLTVSTHTCHDSTELEENADQGISIRDASIELPQALKYNSGSPGYDPLLCVDEASTLLELPSEAAPDVAYIQDGSKKDVVEAELHLRGICQSEPKIAGPDCDWDNLMTDASDFLILSSQNMTEAFKGLMNKPLDPLVHIVNPVASGSAHENEDHPPEPIPASDTDHTQVNLANVALVDSNPSEKMEDEHVYVIHRGIRRRCLDFEMASVRRNNIDDTPNTSSIIAKPDERDIGNEKQMLPTKQSGDSQRCFLPGIGLHLNALATLKDHGSIKSEKLSSGKQPNLLGSASSLPPSTSQEHHLSLVPVSSERDLDPSENEVQPVEDCSHSSAYMAGEDFHQNSPKKKRRKMETAGESESCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQDCFNKPIHEDTVLQTRKQIESRNPLAFAPKVIRSSDSVPEIGDDPNKTPASARHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKNTYGRKDGTAPTGIEAEAEEETEACEKGVVEKASQKTEIQNFEDNPDSALPTTPLRISRPLLPLPFSSKGKPPRSFVATISASGLYASQKLGKPNAILPQAKFEKPLLHTAAADEMMDVIRGDSSPITCIKTSSPNGKRISSPNCDFGSSPTRRGGRKLILQSIPSFPSLTPHH* 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0657 752 MobiDBLite consensus disorder prediction 88 109 - -
Dod06g0657 752 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 752 - -
Dod06g0657 752 MobiDBLite consensus disorder prediction 373 424 - -
Dod06g0657 752 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 545 580 IPR005172 -
Dod06g0657 752 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 459 494 IPR005172 -
Dod06g0657 752 ProSiteProfiles CRC domain profile. 457 582 IPR005172 -
Dod06g0657 752 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 752 IPR044522 GO:0003700
Dod06g0657 752 MobiDBLite consensus disorder prediction 710 727 - -
Dod06g0657 752 MobiDBLite consensus disorder prediction 710 732 - -
Dod06g0657 752 MobiDBLite consensus disorder prediction 75 122 - -
Dod06g0657 752 SMART CXC_2 542 583 IPR033467 -
Dod06g0657 752 SMART CXC_2 456 497 IPR033467 -
Dod06g0657 752 MobiDBLite consensus disorder prediction 375 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0657 Dod-Chr6 7985966 7990558 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0657 23 752 CPP Transcription Factor Family AT4G14770 46.011 1.36e-163 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Dod06g0657 TCR 2.3e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0657 - - adu:107467046 1062.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0657 06 7985966 7990558 Dod06g0657 06 7985966 7990558 ECH