Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0656 ATGCACTCGCAAGATGGGGATGCCGGAACACCAAAGAGGGGATTGGAAGAAGGTGAGGCTTTGAATTCAAAGATGAATCGCAGTGGAAATCTAAGCAATAAAGATATGATTCTTAGAGCAGATAAAATTGATCTGAAGAGTTTGGATGCTGAGCTAGAGAAGCACTTGACCAGGGTTTTTTCCAAAAGCATTGAGGCAAAAAGGCCTAAAGAAGAGTGGGAGATTGATTTGGCCAAATTGGATTTGCGATATGTGGTAGCTAATGGGGCCTATGGTACTGTCTACAGGGGCACCTATGATGGCCAAGATGTTGCAGTTAAAGTGCTGGATTGGGGGGAGGATGGTGTTGCTTCTGCCGCTACCTTACGAGCATCATTTCGGCAGGAAGTTACTGTTTGGAACAAACTTGATCATCCAAATGTCACAAAATTCATTGGAGCTTCAATGGGGACATCAAATCTTAAGATTCCCGACCAAACAGGTGGTCAAGATTCCCTTCCTTCCCAAGCATGTTGTGTCATCGTTGAGTTTGTCCACGGTGGAACACTAAAACAGTACTTATTTAAAAATAGACGGAAAAAACTTCCGTATAAGGATGTGATTCAGCTGGCTTTGGATCTCTCTAGAGGTCTTAGTTATCTGCATGCGAAAAAAATTGTGCATCGTGATGTTAAAGCAGAGAACATGTTGCTTGACACCAATCAAAATTTGAAAATAGCTGATTTTGGAGTTGCACGTGTTGAAGCTTTGAACCCAAGTGAGATGACAGGTGAAACTGGAACCATTGGATATATGGCACCTGAGGTTCTACATGGCAAGCCTTACAACAGAAGATGTGATGTCTACAGCTTTGGCATTTGCCTGTGGGAAATTTATTGCTGCGATATGCCTTATCCAAATCGAAGCTTTACTGATGTGTCATCTGCCGTTGCTAATGAGAACTTGCGGCCAGATATTCCTAGATGCTGCCCAAGTGCCTTAGCAAACATCATGCGAAAATGCTGGGACGCGAAGCCGGACAAGCGTCCAGAGATGCATGAGGTGGTGAGAATGCTAGAGGCAATTGATACGAGCAAAGGTGGTGGAATGATACCTGATGATCAGACCCCATTTTGCTTCTGTTTTGGACCTACCCGTGGTCCCTAA 1146 0.4407 MHSQDGDAGTPKRGLEEGEALNSKMNRSGNLSNKDMILRADKIDLKSLDAELEKHLTRVFSKSIEAKRPKEEWEIDLAKLDLRYVVANGAYGTVYRGTYDGQDVAVKVLDWGEDGVASAATLRASFRQEVTVWNKLDHPNVTKFIGASMGTSNLKIPDQTGGQDSLPSQACCVIVEFVHGGTLKQYLFKNRRKKLPYKDVIQLALDLSRGLSYLHAKKIVHRDVKAENMLLDTNQNLKIADFGVARVEALNPSEMTGETGTIGYMAPEVLHGKPYNRRCDVYSFGICLWEIYCCDMPYPNRSFTDVSSAVANENLRPDIPRCCPSALANIMRKCWDAKPDKRPEMHEVVRMLEAIDTSKGGGMIPDDQTPFCFCFGPTRGP* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0656 381 Gene3D Phosphorylase Kinase; domain 1 69 158 - -
Dod06g0656 381 SMART serkin_6 80 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0656 381 MobiDBLite consensus disorder prediction 1 20 - -
Dod06g0656 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Dod06g0656 381 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 20 374 - -
Dod06g0656 381 PRINTS Tyrosine kinase catalytic domain signature 279 301 IPR001245 GO:0004672|GO:0006468
Dod06g0656 381 PRINTS Tyrosine kinase catalytic domain signature 213 231 IPR001245 GO:0004672|GO:0006468
Dod06g0656 381 PRINTS Tyrosine kinase catalytic domain signature 175 188 IPR001245 GO:0004672|GO:0006468
Dod06g0656 381 PRINTS Tyrosine kinase catalytic domain signature 323 345 IPR001245 GO:0004672|GO:0006468
Dod06g0656 381 MobiDBLite consensus disorder prediction 1 28 - -
Dod06g0656 381 Gene3D Transferase(Phosphotransferase) domain 1 180 362 - -
Dod06g0656 381 Pfam Protein tyrosine and serine/threonine kinase 83 352 IPR001245 GO:0004672|GO:0006468
Dod06g0656 381 ProSiteProfiles Protein kinase domain profile. 80 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0656 381 SUPERFAMILY Protein kinase-like (PK-like) 66 352 IPR011009 -
Dod06g0656 381 PANTHER KINASE ATMRK1, PUTATIVE-RELATED 20 374 - -
Dod06g0656 381 CDD STKc_MAP3K-like 89 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0656 Dod-Chr6 7956732 7960338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0656 22 381 MAP Kinase Kinase Kinase AT3G22750 74.317 0.0 579
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Dod06g0656 PK_Tyr_Ser-Thr 5.8e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0656 - - gmx:100803917 639.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0656 06 7956732 7960338 Dod06g0656 06 7956732 7960338 ECH
Dod06g0656 06 7956732 7960338 Dod02g1307 02 15812000 15815480 PCT