Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0652 ATGTTCTCTTCCACATATGACTCCAACCCTTTCCCTAACTTCCCCTCATCTTCTTACCCTACCCTTCCGTTTTACATTGATCCTGAGAATGATTTTGCATGTAATAACACCACCCTCCTTCATGATCCACTTGTTGTTGCTCCCTTCATACCCTCCAGTGCTCATGATGCTCCATTCCCAGAAGACTCTCTTGCCAATTTGGCAGTTGCAGACTGCACTGCTATCCTTGATCAAGATGTTAGTAATGGCTATGGTGCCCTCTATGGTGGTGTTCCCAATTTGGTCACTCATAAACCTGCAGCCATAGCCAAGAAAGATAGGCACAGCAAGATTCACACATCTCAGGGTTTGAGGGACCGCAGGGTGAGACTCTCTAGTGAAATAGCCCGCAAGTTCTTTGATCTTCAGGACATGTTGGAGTTTGACAAGCCCAGCAACACCCTTGAGTGGCTCTTCACAAAGTCTGAGAGTGCAATCAAGGAGCTAGCTAGAAGCAAGCATAGCTGCAGCAGTTCTGGTGAGAAGTGCTCCTGTGACCCTTGTGAGCCACAACAAGGGGTGGTGCATTCAAGTGACAGATCATTGGTGGGAGGTGTTGGTGATTCTTCCTCCAAAGGGAGAAAGTTGAAGTGGACACAGAGGGAGGATGTTTGTGTTCAGACAAAAAAGGAGTCAAGGGATAAGGCAAGGGCAAGGGCAAGAGAAAGGACTTGTTACAAGATGAACAACAACAACAACAGCAACAACAACAACAACAATGGGAGGGTGCAAGATTTGGAGGAAAGGTGCCCTGCAACTGCAAATACTGCTCAAGTGCTGCACCAATTGAGGTCTTCACTTCAGCCTGAGCTTGAGGCATGTGTGAGATGGCCTCAGATGGTTCAACCTTACCATCACCTACTTGGTGGTGAAGCACATGGGGATGGTTTTAATAATGTCATTGAGGAATCTATTATGATTAAAAGGAACATGAAGCCATCTTTGATGTCTTCTGATCATGACCAAAACCTTGCGATCCCTAAGGAAGCAAGTTTCAACAACATTAATGACTACTACTCATTCCCCTATTCCACTACAAATTGGGATACTAATGAGACCATTAACGGGTGCTCCAACCTTCGTGGAATAGCCACCATGAATATATCAACATGTTTCATGAACCAGTGGTAA 1170 0.4556 MFSSTYDSNPFPNFPSSSYPTLPFYIDPENDFACNNTTLLHDPLVVAPFIPSSAHDAPFPEDSLANLAVADCTAILDQDVSNGYGALYGGVPNLVTHKPAAIAKKDRHSKIHTSQGLRDRRVRLSSEIARKFFDLQDMLEFDKPSNTLEWLFTKSESAIKELARSKHSCSSSGEKCSCDPCEPQQGVVHSSDRSLVGGVGDSSSKGRKLKWTQREDVCVQTKKESRDKARARARERTCYKMNNNNNSNNNNNNGRVQDLEERCPATANTAQVLHQLRSSLQPELEACVRWPQMVQPYHHLLGGEAHGDGFNNVIEESIMIKRNMKPSLMSSDHDQNLAIPKEASFNNINDYYSFPYSTTNWDTNETINGCSNLRGIATMNISTCFMNQW* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0652 389 ProSiteProfiles R domain profile. 223 240 IPR017888 -
Dod06g0652 389 ProSiteProfiles TCP domain profile. 104 162 IPR017887 -
Dod06g0652 389 Pfam TCP family transcription factor 103 243 IPR017887 -
Dod06g0652 389 MobiDBLite consensus disorder prediction 187 206 - -
Dod06g0652 389 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 19 384 - -
Dod06g0652 389 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 19 384 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0652 Dod-Chr6 7905989 7907158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0652 95 245 TCP Transcription Factor Family AT1G67260 40.828 6.61e-25 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Dod06g0652 TCP 4e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0652 - - aprc:113871835 488.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0652 06 7905989 7907158 Dod02g3152 02 66510046 66514147 PCT