Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0628 ATGGTGGTGCAACTGTTGAGCCAGAGTACTCTGAGTCTGAGTTCATGGAAGTTGATCCTACTGGAAGATATGGAAGAGTATATATATAATAATCCTTCTGTTACTGCTCAGTTTTCTTCAGTTATTTACTCCCTCAAGTTCTTTATTTTGATTCTTGGTTTTGAATTCCATGTTTGGCAGTACAATGAAATTCTTGGCAAAGGAGCTTCCAAGATAGTTTATAGGGCATTTGATGAGTATGAAGGGATTGAAGTTGCATGGAATCAAGTGAAGCTTTACGACTTTTTGCAGAATCCAGAAGACCTTGAGAGGTTGTACTGTGAAATTCATCTGCTCAAGACATTGAAACACAAGAACATCATGAAGTTCTATACTTCTTGGGTTGATACTGCCAACAGGCACATTAACTTTGTCACTGAGATGTTTACTTCTGGGACTCTCAGACAGTACAGGCTTAAACACAGAAGGGTTAACATCAGAGCTGTAAAGCATTGGTGCAGGCAGATTTTGGATGGGCTCCTCTATCTCCACAGTCATGACCCTCCTGTGATTCATAGAGATCTCAAGTGTGATAACATTTTCATCAATGGCAACCAAGGGGAAGTCAAAATTGGTGATCTTGGCCTTGCTGCAATTCTCCGCAAATCTAATGCTGCTCGATGTGTTGGCACACCTGAGTTTATGGCTCCAGAAGTATACGAAGAGGATTACAATGAATTGGTTGACATATACTCTTTTGGAATGTGCATCTTGGAGATGGTCACCTTTGAATATCCCTATAGTGAATGCAACCATCCTGCTCAAATTTACAAGAAAGTTGTCTCTGGGAAGATGCCAGAAGCTCTTTACAAAGTAAATGATCCCGAGGTTCGACAGTTTGTAGAGAAATGCTTAGCAACTGTATCCCTCAGACTCTCAGCAAGGGAACTCTTGGGGGACCCTTTTCTCCAGTTTGATGATCATGGATCTGACTTGAAATCATTGCAGTATCAAAGGGACTGCTATGAAGTAACCCCAATAATTAGAAAACCCCTTAATGGAATGCATAGCAGCAACACCACCTTAATGAGTGGGTCCACTGAAAATCTTGGAGGTTATGGGCCTGTATCTGAACTGGATTATCCTCAAGATGATTTTGAAACCAGTGAAATTAATCTCTTTGATTGTGAAGAGGATGATAATTTGGATGAAGTTGACACCTCAATCAAAGGTAGGAGAAGAGACGATGACGGCATCTTTCTGAGAATCAGAATCGCAGACAAGGAAGGTCGGGTTAGAAACATCTACTTCCCATTTGACACCGAGACTGATACTGCATTGAGTGTTGCTAAGGAAATGGTAGCTGAGCTTGACATAACTGACCAAGATGTAACAAAATTAGCTGATATGATAGATAATGAAATTGCAAGCTTGGTCCCAGAGTGGAAAAGGGGACCCAGAATAGAGGAAACTTCACCATGTGCAAGTTTCTGCCATCATTGTGCCACTAACGGTTCCTTATTTGATTATGCATCACCAAATAATCCATGTGCCAAGAATCTGCAATTTTTTCATTGTTCTAAGAATGGATGTGCTGCAGTTCACGGCAGATTTGAGGAGATTACATACCAAGTTGAAGGGTCTGAAAATAGTACCACAGAAGCTACACCAAGTCCATCAAGCCATTCCACTGGCATTCATTATACTGATATCTGGGCTCAGCGAGATGAACCAGATACATGTTCTGAGGGGTTGAAAGATATACATTGTGACAATTCTCATGAGTCATCAAACCAATCAACCATCAAGAATGATGGGAGAATTATTAATGTGGATGATCAAAGTGATCCCAATGCTAGAAAGCCTCCTCCTAGCCCTTCATTAGATTGTGTTCTCATGGACAGTGAGAACGAAATCAGGCAAGAACTAAGATGGCTCAAAGCAAAGTACCAGATGCAGTTAAGAGAGCTAAGAGACCAGCAACTAGGGCGTAAACCAAAAATCACAAGCACATCACCTGACACTGAAAAATTAGAGCCTGGAAAAGATGGAGTTCTAAAGCAATCAGTTACATCCCACTTAAAGATACAAAACAAAAAACCATGGTTGAGGTCCATGGGAAAGCATTTTCCTGTTGATGCTGAGAAGTGCACCACTTTGGCTGATCAATTGGTTCAAAATGTTGATGAGACAAGTGGGTCTAACAGCCCAGAGCAAATGATCACGGCCAAGGATTTCTTTGCAGGAGCTTTGCTTCCACACTCCCTTCACAGGGCCACCTCTCTTCCTGTTGACGCAGTAGATTTCTAG 2289 0.4146 MVVQLLSQSTLSLSSWKLILLEDMEEYIYNNPSVTAQFSSVIYSLKFFILILGFEFHVWQYNEILGKGASKIVYRAFDEYEGIEVAWNQVKLYDFLQNPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRHINFVTEMFTSGTLRQYRLKHRRVNIRAVKHWCRQILDGLLYLHSHDPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAILRKSNAARCVGTPEFMAPEVYEEDYNELVDIYSFGMCILEMVTFEYPYSECNHPAQIYKKVVSGKMPEALYKVNDPEVRQFVEKCLATVSLRLSARELLGDPFLQFDDHGSDLKSLQYQRDCYEVTPIIRKPLNGMHSSNTTLMSGSTENLGGYGPVSELDYPQDDFETSEINLFDCEEDDNLDEVDTSIKGRRRDDDGIFLRIRIADKEGRVRNIYFPFDTETDTALSVAKEMVAELDITDQDVTKLADMIDNEIASLVPEWKRGPRIEETSPCASFCHHCATNGSLFDYASPNNPCAKNLQFFHCSKNGCAAVHGRFEEITYQVEGSENSTTEATPSPSSHSTGIHYTDIWAQRDEPDTCSEGLKDIHCDNSHESSNQSTIKNDGRIINVDDQSDPNARKPPPSPSLDCVLMDSENEIRQELRWLKAKYQMQLRELRDQQLGRKPKITSTSPDTEKLEPGKDGVLKQSVTSHLKIQNKKPWLRSMGKHFPVDAEKCTTLADQLVQNVDETSGSNSPEQMITAKDFFAGALLPHSLHRATSLPVDAVDF* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0628 762 Gene3D - 395 479 - -
Dod06g0628 762 Coils Coil 633 653 - -
Dod06g0628 762 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Dod06g0628 762 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1-RELATED 60 751 - -
Dod06g0628 762 MobiDBLite consensus disorder prediction 587 601 - -
Dod06g0628 762 Pfam Protein kinase domain 61 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0628 762 MobiDBLite consensus disorder prediction 539 558 - -
Dod06g0628 762 SMART serkin_6 59 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0628 762 MobiDBLite consensus disorder prediction 572 622 - -
Dod06g0628 762 Gene3D Transferase(Phosphotransferase) domain 1 142 321 - -
Dod06g0628 762 MobiDBLite consensus disorder prediction 654 675 - -
Dod06g0628 762 MobiDBLite consensus disorder prediction 572 586 - -
Dod06g0628 762 Gene3D Phosphorylase Kinase; domain 1 56 140 - -
Dod06g0628 762 ProSiteProfiles Protein kinase domain profile. 59 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0628 762 CDD STKc_WNK 61 316 - -
Dod06g0628 762 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 60 751 - -
Dod06g0628 762 SUPERFAMILY Protein kinase-like (PK-like) 59 317 IPR011009 -
Dod06g0628 762 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 414 468 IPR024678 GO:0004674|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0628 Dod-Chr6 7642284 7646094 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0628 60 668 MAP Kinase Kinase Kinase AT3G22420 50.998 0.0 604
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Dod06g0628 Pkinase 3.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0628 K08867 - gmx:100804179 1179.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0628 06 7642284 7646094 Dod06g0628 06 7642284 7646094 ECH