Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0622 ATGGATTTCTGTGCACCAAATTCCACTGCATCAAACATTGCAGTGGTAGAATATCAAGATGCTGAAATAACAAGCGATAGATTTGTTGATCTGCAAGTAATAGAGTCTTTTGATTTGGAGAGTTGCAAGGAGGAAGTGTTGAATGATTGTTTCTGCATGGCTGGTGTTTGGTCTGACTCAGTTTGTTACAAGAAAAGGATCCCTCTTTCAAATGCCAGAAGAAGCATCCCTGCCACTAGCAATAGAGTGGCACTGATTAAAGTTGCTCAGGTTCACCAAGACAACGGAAATGATTCACCTTCTGATGTTCTTTTGATTGTAGCCCTTTCAACATGCTCCTTACTTGCTGTTGTGTTTGCTACTATTGCTATCTATCATCACCCAACCTTTAGCCATCTCATGCATAAAGGGTCACCCCCAAAGCCAAAGCCTGTGGACATCAATCTGAAGTCATTTTCATTCCAAGAGTTGAGAGAAGCAACAAGTGGGTTCAGGAACGAACTTGGCCACGGAGGCTTTGCTACTGTGTATAGTGGGGTGTTGACCTTGGAGGGTGAACAGGTTGAGGTTGCTGTGAAACAACTGGAAAGAGTAGAAGAAAAAGGTGACAAAGAATTTGTTAATGAAGTTCAAGTAATTGGTATGACTCATCATAGGAATCTTGTAAGGTTGTTGGGTTTCTGCAATGAGCAAAACCATCGTCTTCTGGTTTATGCGATGATGAGAAATGGGACACTATCCAATTTCCTTTTTAGGGAGGGGGATAAACCCAGTTGGGAGCATAGAGCCAAAATTGTTCTCGAAATTGCTAGTGGCATAGTGTACCTGCACTGA 834 0.4221 MDFCAPNSTASNIAVVEYQDAEITSDRFVDLQVIESFDLESCKEEVLNDCFCMAGVWSDSVCYKKRIPLSNARRSIPATSNRVALIKVAQVHQDNGNDSPSDVLLIVALSTCSLLAVVFATIAIYHHPTFSHLMHKGSPPKPKPVDINLKSFSFQELREATSGFRNELGHGGFATVYSGVLTLEGEQVEVAVKQLERVEEKGDKEFVNEVQVIGMTHHRNLVRLLGFCNEQNHRLLVYAMMRNGTLSNFLFREGDKPSWEHRAKIVLEIASGIVYLH* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0622 277 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 2 277 - -
Dod06g0622 277 ProSitePatterns Protein kinases ATP-binding region signature. 168 193 IPR017441 GO:0005524
Dod06g0622 277 PANTHER SERINE/THREONINE-PROTEIN KINASE 2 277 - -
Dod06g0622 277 Pfam Protein tyrosine and serine/threonine kinase 165 277 IPR001245 GO:0004672|GO:0006468
Dod06g0622 277 Gene3D Transferase(Phosphotransferase) domain 1 144 277 - -
Dod06g0622 277 ProSiteProfiles Protein kinase domain profile. 162 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0622 277 SUPERFAMILY Protein kinase-like (PK-like) 141 277 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0622 Dod-Chr6 7579120 7579953 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0622 78 277 Receptor kinase-like Gene Family AT4G29050 34.975 6.08e-29 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Dod06g0622 PK_Tyr_Ser-Thr 2.6e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0622 - - pvu:PHAVU_002G046100g 370.548