Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0608 ATGATATATGTGTTGATCAACTTGGTTTTGGTCTACTCCCCTGTATATATCATCACTCATTTTGCACCGGCAGCTGCTGGATCTGGTATACCTGAGATCAAGGGTTACTTAAATGGTGAGACAAACTTGTCAAGTATTTCTGTTATGTGTTCATGCAGATTCTTCAGAATTCCCGTATATTCTGAAAGTGCTGATTTTTCAGCTGATTTTTTATTATGTTCAGGAGTTGATATTCGTGGCATCCTTCTTTTCAGAACTTTGATTGGAAAGATACTTGGAAGCATTGGTTCAGTGGGAGGAGGCCTTGCTTTGGGCAAAGAAGGTCCTCTTGTTCATACTGGTGCTTGA 348 0.3994 MIYVLINLVLVYSPVYIITHFAPAAAGSGIPEIKGYLNGETNLSSISVMCSCRFFRIPVYSESADFSADFLLCSGVDIRGILLFRTLIGKILGSIGSVGGGLALGKEGPLVHTGA* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0608 115 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 72 115 - -
Dod06g0608 115 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 1 39 - -
Dod06g0608 115 SUPERFAMILY Clc chloride channel 2 48 IPR014743 -
Dod06g0608 115 SUPERFAMILY Clc chloride channel 76 115 IPR014743 -
Dod06g0608 115 Pfam Voltage gated chloride channel 75 115 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Dod06g0608 115 Gene3D Clc chloride channel 1 58 - -
Dod06g0608 115 Gene3D Clc chloride channel 70 115 - -
Dod06g0608 115 PANTHER CHLORIDE CHANNEL PROTEIN CLC-D 72 115 - -
Dod06g0608 115 PANTHER CHLORIDE CHANNEL PROTEIN CLC-D 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0608 Dod-Chr6 7421457 7423096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0608 1 115 Ion Channels AT5G26240 59.130 7.33e-33 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0608 K05016 - pop:7459031 105.916