Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0596 ATGTTGCAATTTGATTTTGATACCATCAGAGGGGCCACAAACAACTTCTCCTATGACAGGAAATTGGGGGAAGGAGGATTTGGTGAAGTTTATAAGGGTACGCTACCTAAAGGGCAAGATATTGCTGTGAAGAGACTATCAAAAAGTTCTCAACAAGGAGGAAACGAATTTAAGAATGAAGTGCTTTTGGCAGCCAAACTCCAACACAAAAATCTTGTAAGGACACTGGGATTTTGCTTGGATGAGGAAGAAAAGATGCTCATATATGAATTTGTTCCTAACAAAAGCTTGGACCATTTCCTATTTGATCCTAACAAGCAACATCAATTGAATTGGCCAAGACGATATAAGATAATAGAAGGAATTGCTCGAGGAATGCTTTATCTTCATGAAGATTCTCGACTCAAAATTATACATCGTGATCTTAAAGCCAGTAACATACTATTAGATGAGGATTTAAATCCAAAAATTTCTGATTTTGGAATGGCAAGAATTTTTGGTGCTGATCAAACTCAAGGAAATACAAACAAAATTGTTGGAACATATGGATACATATCTCCGGAATATGCCATACATGGACATTTTTCTGTCAAAGCGGATGTTTATAGTTTTGGTGTCCTAATTCTAGAGATAATAAGCGGGAAGAAGATCACATCCTTCCATGAATCAGATTATGGTGGGAACCTCTTGAACTATGCTTGGACCCATTGGAGAGATGACACACCATTGGAGATATTGGACATGTCTTTGAAAGACTCATATTCAAGAGCTGAAGTGATTAGATGCATCCATATTGGGTTATCTTGTGTTCAGGAAGATCCAACACAAAGGCCAACAATGCAAAGCATAGTTTTAATGCTAAACAGTCATTCTGTTACTCTTGCAACTCCTAAACAACCTGCAGGTTATTTTCAGAGAAGAATCCAGCAGAGTTCCCAGCAAAGGAGCTAG 951 0.3785 MLQFDFDTIRGATNNFSYDRKLGEGGFGEVYKGTLPKGQDIAVKRLSKSSQQGGNEFKNEVLLAAKLQHKNLVRTLGFCLDEEEKMLIYEFVPNKSLDHFLFDPNKQHQLNWPRRYKIIEGIARGMLYLHEDSRLKIIHRDLKASNILLDEDLNPKISDFGMARIFGADQTQGNTNKIVGTYGYISPEYAIHGHFSVKADVYSFGVLILEIISGKKITSFHESDYGGNLLNYAWTHWRDDTPLEILDMSLKDSYSRAEVIRCIHIGLSCVQEDPTQRPTMQSIVLMLNSHSVTLATPKQPAGYFQRRIQQSSQQRS* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0596 316 ProSitePatterns Protein kinases ATP-binding region signature. 22 44 IPR017441 GO:0005524
Dod06g0596 316 PANTHER PROTEIN, PUTATIVE ISOFORM 1-RELATED 2 306 - -
Dod06g0596 316 CDD STKc_IRAK 22 288 - -
Dod06g0596 316 ProSiteProfiles Protein kinase domain profile. 16 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0596 316 Gene3D Transferase(Phosphotransferase) domain 1 92 301 - -
Dod06g0596 316 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 2 306 - -
Dod06g0596 316 PIRSF ILK 8 301 - -
Dod06g0596 316 Gene3D Phosphorylase Kinase; domain 1 1 91 - -
Dod06g0596 316 Pfam Protein tyrosine and serine/threonine kinase 18 286 IPR001245 GO:0004672|GO:0006468
Dod06g0596 316 SUPERFAMILY Protein kinase-like (PK-like) 4 300 IPR011009 -
Dod06g0596 316 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Dod06g0596 316 SMART serkin_6 16 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0596 Dod-Chr6 7209167 7210739 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0596 2 316 Receptor kinase-like Gene Family AT4G05200 63.810 3.67e-149 433
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod06g0596 PK_Tyr_Ser-Thr 1.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0596 - - twl:119989066 475.707