Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0577 ATGTACTCTCAGAATCTGATACTCTCCGCAGAAAACCCTAGACCCCCAACGTTTCAGCAATCACTCCCTTCTTCTTTTTCTTCTTCTTTGGTTACCGCGAAACCCATGAGCAATGAGATCGCACAGAAGCCACCACCTTCGATTCTCGTCGGCAGGTTCAAGGCACTGCTCAAGCAGCGCGACGACGAGCTCAGGGAATCGTCTCCCGGGGCGCACGTGCCCCCGCCGTCCACGGAGGAAATCGTGCAGCTCTACGAGCTGCTGTTGTCGGAGCTCACGTGCAATCTGAAGCCAATCATCACCGATCTCACCATCATCGCTGAACAGCAGATGGAGCACGCTAAGGGCATCGCCGACGCTATCTGCTCTCGCATTCTCGAGGTGCCTGCAGATCAAAAGCTTCCTTCGCTCTATCTTTTGGACAGTATCGTCAAGAATTTTGGTCAGGAGTATGTTAAATACTTCTCATTACGTCTGCCTGAAGTTTTCTGTGAGGCATACAGGCAGGTTCAGCCTAATTTGCACCCTGCTATGCGCCATCTCTTTGGAACCTGGTCAAAAGTCTTTGCACCATCTGTCTTACACAAGATTGAAGCTGAGTTGCAATTTTCTCAAGCAGTTAATAATCAATCCACCATGAATCCCCTCAGGGCATCTGAATCTCCTCGGCCAAGTCATGGCATACATGTAAATCCCAAGTACTTGCGGCAATTAGAGCGCTCAACCATGGATAGTGTTAGCAGTGAAAAGTTTGACCTGTCAGGAAAGGCCAGTAATACAAAGTTTGGCCTTGTTGCTAGTAAGACAAACCAATTTGTATCTAGCAGGCTTGGAAAATCCTCTTCTCCTTCAAGAATTGGTTTAGATAGGCCTTTGTCTGCATCAGTAGATGAATATGCAGTTGACAATCCTGCTGGCAGGATAGTTGAGAAAGAGTCTCCTCATAATTATGGAGTACCCAAAGCAGTAGGTAGAGAGGATGATTTGAGTGAATGGCAACGAAAGCAGTATTCCGGTGATGTTCGGAATCGATTTCAAACTTCTATGACATACAGCCTTAGCAATGGACATCAGCGTCAAAGTCCAAGAGCTCTAATTGATGCATATGGGAGTGACAAAAGCCAAGAAACTTCAAGCAGTAAGCCTCTGTTAGTTGAACGGCTGGATAGAAATGGTATGGACAACAAGTTGTCAACATCTTGGCAGAATACTGAAGAGGAGGAGTTTGATTGGGAAGATATGAGTCCAACATTAGCAGACCATAGTAGGAATAATGGCTTCCCACCATCAGCAATTGGTTTCTCCAGGGAAAAGCCTGTCGGTGTTGCAGCTAATGCAATTTTGTCAGAGCAAGATACCAGAAAGGGTTGGTCCAGTGGGTCTCAGCTTCATCAAGTAGATGATTCTTCTGTTATAGCAGCAGATGCATTTCCCTCTTCAGCTTATGGTCATGCATCCGTGGGTCAGGTATCTGGATTCCAAAATCAAATAAATCAGGGTCTGGGTTCTCGTCAACCTCATGATGCTTGGAAGATTTCTCATCCTTCGCAAAACATCTTTAATATCAGGGGACAAGGAAGGAGTCTTTTGATGCCTCCTATTGATAACATTCCCAATGCTGATGTAAACCTCTATGGGATTCGACCTGCAGTGTCCAGGATGGTTTCTGGTCTTGCGTCTAATGCAGAGGCTCGTCCGCCAGTTTTGCCTGCATCTTTTGAAATTAGGCCTTCTGTAACTGTGCATGTCACTCGCCCTCCTACCTTAAATCCGATATTTCCAATGCAAAAACATGTTAGGAATCAGTTTGAAGCAATGAATACTAGTAATCCCCTTGTGAATCACGGTCCAAATAAATCTTTGTTTATGCTTGAACAGCCATTGGATATTGTTGAGAACAAGGATACAGGTAAAGGAAAGATACCACAGTTGCCTAACCAGCTGGCTGGATTGCTTCCATCCAACCTGCAAAACCGTGGACAAGCACCACAACTACATTATTTTCCATCTCGGGATCCATCATCATCACAATTTAGTCATGTGAGCTCCTTGCAAGGACATGGTGCTTCCATGTCAAATCCATTACCTGTTACACAGTTTCCTTTACCGATGCAAGGTATTGCAAATAACTCCTTACAATTACAGGGGGGGGTCCATCCCCCTTTGCCTCCAGGTCGCCCTCCTGCTCCGTCTCAAATGTTACCCCATCCAAATGCTGGTCCATATGTGCCAAACCAACAGCCAACTGTTGCATATTCTAATTTAATTAATTCACTTATGTCCCAAGGCGTGATCTCCTTGGCTAACCAGCCACCTATACAGGATTCTGTTGGAACTGAGTTCAATGCAGATATTCTTAAGGTTCGTTATGAGTCTGCAGTCAATGCCTTATATCGTGATCTCCCTAGACAATGCACGACTTGTGGGCTCCGATTCAAATGCCAAGAGGAGCACAGTAGTCATATGGATTGGCATGTGACTAAGAACCGGATGTCTAAAAGTCGTAAGCAGAAGCCTTCTCGTAAGTGGTTTGTGAGTGACAGCATGTGGCTTAGTGGTGCTGAGGCATTGGGAACAGAATCAGTTCCAGGTTTTTTGCCAACAGAGACCCTAGAGGAAAAGAAAGATGAGGAAGAATTGGCAGTGCCAGCTGAAGAGGACCAGAATACATGCGCATTATGTGGAGAGCCTTTTGAAGAGTTTTACAGTGATGAAATGGAGGAATGGATGTATAGGGGAGCTGTATACCTCAATGCACCCACGGGAGCAACTGCGGGCATGGACAGGTCACAGTTAGGCCCCATTATTCATGCTAAATGCAGGTCAGATTCTAATGTGGTCCACTCTGAAGATTCTGGGCTGGATGAAGGGGGTGCCAATGAAGACGGCAGTCAAAGAAAACGAATGCGGAGTTGA 2916 0.4585 MYSQNLILSAENPRPPTFQQSLPSSFSSSLVTAKPMSNEIAQKPPPSILVGRFKALLKQRDDELRESSPGAHVPPPSTEEIVQLYELLLSELTCNLKPIITDLTIIAEQQMEHAKGIADAICSRILEVPADQKLPSLYLLDSIVKNFGQEYVKYFSLRLPEVFCEAYRQVQPNLHPAMRHLFGTWSKVFAPSVLHKIEAELQFSQAVNNQSTMNPLRASESPRPSHGIHVNPKYLRQLERSTMDSVSSEKFDLSGKASNTKFGLVASKTNQFVSSRLGKSSSPSRIGLDRPLSASVDEYAVDNPAGRIVEKESPHNYGVPKAVGREDDLSEWQRKQYSGDVRNRFQTSMTYSLSNGHQRQSPRALIDAYGSDKSQETSSSKPLLVERLDRNGMDNKLSTSWQNTEEEEFDWEDMSPTLADHSRNNGFPPSAIGFSREKPVGVAANAILSEQDTRKGWSSGSQLHQVDDSSVIAADAFPSSAYGHASVGQVSGFQNQINQGLGSRQPHDAWKISHPSQNIFNIRGQGRSLLMPPIDNIPNADVNLYGIRPAVSRMVSGLASNAEARPPVLPASFEIRPSVTVHVTRPPTLNPIFPMQKHVRNQFEAMNTSNPLVNHGPNKSLFMLEQPLDIVENKDTGKGKIPQLPNQLAGLLPSNLQNRGQAPQLHYFPSRDPSSSQFSHVSSLQGHGASMSNPLPVTQFPLPMQGIANNSLQLQGGVHPPLPPGRPPAPSQMLPHPNAGPYVPNQQPTVAYSNLINSLMSQGVISLANQPPIQDSVGTEFNADILKVRYESAVNALYRDLPRQCTTCGLRFKCQEEHSSHMDWHVTKNRMSKSRKQKPSRKWFVSDSMWLSGAEALGTESVPGFLPTETLEEKKDEEELAVPAEEDQNTCALCGEPFEEFYSDEMEEWMYRGAVYLNAPTGATAGMDRSQLGPIIHAKCRSDSNVVHSEDSGLDEGGANEDGSQRKRMRS* 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0577 971 ProSitePatterns Zinc finger C2H2 type domain signature. 805 825 IPR013087 -
Dod06g0577 971 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 43 946 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Dod06g0577 971 ProSiteProfiles CID domain profile. 77 205 IPR006569 -
Dod06g0577 971 PANTHER POLYADENYLATION AND CLEAVAGE FACTOR HOMOLOG 4 43 946 - -
Dod06g0577 971 MobiDBLite consensus disorder prediction 389 409 - -
Dod06g0577 971 SUPERFAMILY ENTH/VHS domain 76 203 IPR008942 -
Dod06g0577 971 Gene3D - 75 203 IPR008942 -
Dod06g0577 971 MobiDBLite consensus disorder prediction 940 971 - -
Dod06g0577 971 SMART 558neu5 80 202 IPR006569 -
Dod06g0577 971 CDD CID_Pcf11 82 201 - -
Dod06g0577 971 MobiDBLite consensus disorder prediction 1 23 - -
Dod06g0577 971 Pfam CID domain 95 196 IPR006569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0577 Dod-Chr6 7028106 7033503 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0577 679 971 C2H2 Transcription Factor Family AT4G04885 57.929 5.83e-106 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0577 K14400 - gmx:100794796 1411.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0577 06 7028106 7033503 Dod06g0577 06 7028106 7033503 ECH