Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0576 ATGTTTTCCTCAAACTCAAACTCAAACGCCAACTCTCACCAGCAGCACTTGCCTCTGGCTGATGATATGGAATCCCGCTATTCCTTAGAGCATGATGTAAAGAACAGAGAAAATGAAAATGCTGATGAGATTGTGGGTGGTGGCAACCAGAACATGGAACCTCCTCCTTCCAGTTCCGTCCAACAACCCAAAAGGAGGCGCTACATACGCCACACACCACAACAGAAACAACAAATGGAAGCGTTCTTCCTCGAGTGCCCTCACCCAGATGACAGGCAAAGGAGAGAGCTGGGCAAATTGGTGGGGTTAAACTCCATGCAAATCAAGTTTTGGTTCCAGAACAAGCGAACCCAGGCCAAGAATCAACAAGAACGCAATGAGAACGAGGAGTTGAGGGCCGAGAACAAAGAGCTTCGCGCTGAGAATGAAAGCTACAAGCAGATCCTAAGTAATACTATATGTCGTGACTGTGGAGGGCTGCCTCCTCCAGAAATGATCTTTGAGGACCAGCAGATGAGGGCGGAGAATGAGGTTTTAAGAGAAGAGGTAACGCCGATACTCCAAAAGATGTTGCTTATTTATAACAATATCTTTATCCGTAGAATTGATGACACACCATCTCAACACAATAGCATGCCTTTGAGTTCTACTAATCTAGGAGTTGGTGGCCATGGAGCACAACCAGCAGGCATAGTAGGGGAAATGAGTGGTGGTGGTAGTGACCCTCTTAAGTCACTCACAGTTCCTGCCGATAGTTCTGACAAACCCATGATTGTGGAGCTTGCGGTTGAATCGCTAGAGGAACTCACAAGGATGGCTCCGTCAGGACCGCCATTATGGGCCCGTGGCAAGTACTATACTGACATTCTAAATGAACATGAGTACTTTAGGACTTTCCCTAGGGGAATAGGTCCAAAACCGCTGGGGTTTAAATTTGAATCTTCAAGAGAATCCATGGTGGTTTCCATGAATCACATCAACCTCATTGAGATCCTTATGGATGTGGATCAATGGTCACGTGTGTTTTGCAGCATTGTTTCAAGAGCAGCGGTACTTGAGGTCGTATCAAATGGACTGGCAGGAAGCTACGATGGATGGATACAAGTGATGTCAGCTGAGTTCCAGTTCCCTTCACCGTTTGTTCCACCTCGTGAGTACAATTTCCTAAGGTATTGTAAGCAGCTCCCAGGTGGGTCATGGGCGGTGGTTGATGTTTCCTTGGAAACTATACGGCCAAGTACAAAAGTCCCTACAAGCCGAAGAAGGCCCTCTGGATGTTTGATTGAGGCGTTGCCAAATGGTTTCTCAACAAAGGTTACATGGGTTGAACATGTTGAAGTGGATGATAGAGCGCTAGCGCCCCATACTATTTATAAACCTCTAGTTGACTCTGGCCTTGCTTTTGGAGCTAGACGGTGGATGGCTTCATTGGAAAGACAATGCGAACGTATTGCTACATCACTGGCCACCCACACACCACAAAGGCAACGTAGTGGTATATTGATCAGTCGTGAGGGAAGAAAAGGATTGTTGAAGCTGGCAGAGAGGATGGTTATGAGCTTTTATAGTGGTGTTGGTGCTTCTACAGCACAAGCTTGGACAACACTGACTACAGCTGGATGTCATAATAATATAAGGATCATCACCAGAAAGGGTAAGGATGAGCCCGGCAGGCCCACTGGTATTGTTATCGGTGCTGCAACTTCCTTCCGCCTCTCAATTCCTTCGCGGATTGTTCTTGATTCTATTCGAAGTACAAACTTTAGAAGTGAGTGGGATGTTCTCGTTGATGAGGGGCATGCTGAGGAATTCGCATGCATAGAAAATGGTCATGATCCTGCCAACTGTGTCTCTTTACTCGGTGTCAAGAGTTCAAATCCCATGCACAGCACCATGGTTATTCTTCAAGAGAGCTTCACTGATTCCACAGGATCATTCGTGGTTTATGCTCCGATTGACATTGTTTCATTCAACGCTCTCTTGGTTGGTGGCCAACATCCAGATAAAATTGCAATGCTTCCCTCGGGTTTCGTTATTCTTCCTGATGGAGGAACCATAGTTACAGCTGGATCTAGAGGTTGTTTGGTCACAGTTAGCGCTGTTAACACCGTGGTTAAGAATACAGTTGAAAAGATCAAAGCTGTGGTGACCCGTAACATAACCTAA 2166 0.4617 MFSSNSNSNANSHQQHLPLADDMESRYSLEHDVKNRENENADEIVGGGNQNMEPPPSSSVQQPKRRRYIRHTPQQKQQMEAFFLECPHPDDRQRRELGKLVGLNSMQIKFWFQNKRTQAKNQQERNENEELRAENKELRAENESYKQILSNTICRDCGGLPPPEMIFEDQQMRAENEVLREEVTPILQKMLLIYNNIFIRRIDDTPSQHNSMPLSSTNLGVGGHGAQPAGIVGEMSGGGSDPLKSLTVPADSSDKPMIVELAVESLEELTRMAPSGPPLWARGKYYTDILNEHEYFRTFPRGIGPKPLGFKFESSRESMVVSMNHINLIEILMDVDQWSRVFCSIVSRAAVLEVVSNGLAGSYDGWIQVMSAEFQFPSPFVPPREYNFLRYCKQLPGGSWAVVDVSLETIRPSTKVPTSRRRPSGCLIEALPNGFSTKVTWVEHVEVDDRALAPHTIYKPLVDSGLAFGARRWMASLERQCERIATSLATHTPQRQRSGILISREGRKGLLKLAERMVMSFYSGVGASTAQAWTTLTTAGCHNNIRIITRKGKDEPGRPTGIVIGAATSFRLSIPSRIVLDSIRSTNFRSEWDVLVDEGHAEEFACIENGHDPANCVSLLGVKSSNPMHSTMVILQESFTDSTGSFVVYAPIDIVSFNALLVGGQHPDKIAMLPSGFVILPDGGTIVTAGSRGCLVTVSAVNTVVKNTVEKIKAVVTRNIT* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0576 721 ProSiteProfiles START domain profile. 251 486 IPR002913 GO:0008289
Dod06g0576 721 Coils Coil 112 148 - -
Dod06g0576 721 SUPERFAMILY Bet v1-like 254 484 - -
Dod06g0576 721 SUPERFAMILY Bet v1-like 506 685 - -
Dod06g0576 721 Pfam Homeodomain 65 120 IPR001356 GO:0003677
Dod06g0576 721 ProSiteProfiles 'Homeobox' domain profile. 62 122 IPR001356 GO:0003677
Dod06g0576 721 SMART HOX_1 64 126 IPR001356 GO:0003677
Dod06g0576 721 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 40 685 IPR042160 -
Dod06g0576 721 MobiDBLite consensus disorder prediction 1 18 - -
Dod06g0576 721 CDD homeodomain 65 123 IPR001356 GO:0003677
Dod06g0576 721 SMART START_1 260 483 IPR002913 GO:0008289
Dod06g0576 721 Gene3D - 306 483 IPR023393 -
Dod06g0576 721 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN PROTODERMAL FACTOR 2 40 685 - -
Dod06g0576 721 CDD bZIP 115 150 - -
Dod06g0576 721 Pfam START domain 261 483 IPR002913 GO:0008289
Dod06g0576 721 SUPERFAMILY Homeodomain-like 51 123 IPR009057 -
Dod06g0576 721 MobiDBLite consensus disorder prediction 1 64 - -
Dod06g0576 721 CDD START_ArGLABRA2_like 255 482 - -
Dod06g0576 721 MobiDBLite consensus disorder prediction 19 41 - -
Dod06g0576 721 Gene3D - 46 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0576 Dod-Chr6 6999344 7004750 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0576 22 720 Homeobox Transcription Factor Family AT4G04890 51.064 0.0 724
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Dod06g0576 START 9.1e-43 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0576 K09338 - qsu:112016283 711.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1364 02 16430695 16436619 Dod06g0576 06 6999344 7004750 PCT