Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0558 ATGCCAAAAGTGCACGAAGTTGCAACTCGGCAAATAGTTTCACGGTGCCCAAACTCTAGGGAGGCCATAATTTGGTATCACGAGTGCTTCGTTCGCTATTCCAACCGTTGTTTCTTCTCCACCGTGGAGGAATGGCCCAGGCACGAGTTCATGAATTATAGCGTGACTACGAATTCGACGAAAGAAGGAAGCTACGGTTGGTTGTTAGCTAACACCTTGAGCGATGCAGTCGTTGAGGCAGCGAACGCTGGTCCTGTGGGGACTAAGAAATTTGCAACGAAACATGCGAGCTTGGGAGGGTCACATAATGTGTATGCACTTGTTCAGTGCACTCCGGATTTGTCGAGCCAAGATTGCAGTAGATATTTGAGTGATATAATGAAAGATATTCCTTTGTGTTGTCTCGGACGGGATTGTGGAATGGTTCTGTATCCTAGCTGCGGTTTGATGTTTGGCATAGAGCAATTCTACAGGGACGTTTCGCTTGCCGTTGCCAGCACGCGCCCACCTACCTCTCTCGGTACCCATGAAACAGCACCTTCAGAAGAGCAGAAGGGCAGATCATCACTAACGATCATTATACCGGCTGTTTCGATGGTAGTCTTATTCATGGTTTTCTTTGCCAATCATATCCGAAGGATGAAGGCGCTGGCGCGTTATAAGGCTATTCTCGAAGAAAATTTTGGAGATGAAAGTACTACTTTGGAGTCATTGCAATTTGACTTGGCTACACTTGAAGCGGCAACAAATAAGTTTTCGCCTGAGAATATGGTAGGCAAAGGAGGATTCGGGGAAGTTTACAAGGGCACTCTCTCTGACGGACGGGAAGTAGCAATAAAGAGGCTCTCAACAAGTTCTACACAAGGTGCTATAGAATTTAAGAATGAGGTTCTATTAGTGGCCAAACTTCAACACAGAAACTTGGTGGCTTTATTAGGATTTTGCTTACAAGATGAAGAAAAAATACTTGTTTATGAATTTATTCCTAACAAGAGCCTCGATTATTTTTTATTCGATCCTCAAAAGGAACGACTCTTAAGTTGGTATGAGAGATATAAAATTATAAAGGGAATTGCTCAAGCAATTATTTATTTACATGAATATTCTCGTCTTAAAATTATACATCGAGATATTAAACCTAATAATATTTTATTATATAGCAATATGAATCCAAAAATTTCTGATTTTGGAATGGCAAGAATGGTTGCTATAGACAAAGATCAAGGACAAACAAATAGAATTGTTGGCACATAG 1254 0.4139 MPKVHEVATRQIVSRCPNSREAIIWYHECFVRYSNRCFFSTVEEWPRHEFMNYSVTTNSTKEGSYGWLLANTLSDAVVEAANAGPVGTKKFATKHASLGGSHNVYALVQCTPDLSSQDCSRYLSDIMKDIPLCCLGRDCGMVLYPSCGLMFGIEQFYRDVSLAVASTRPPTSLGTHETAPSEEQKGRSSLTIIIPAVSMVVLFMVFFANHIRRMKALARYKAILEENFGDESTTLESLQFDLATLEAATNKFSPENMVGKGGFGEVYKGTLSDGREVAIKRLSTSSTQGAIEFKNEVLLVAKLQHRNLVALLGFCLQDEEKILVYEFIPNKSLDYFLFDPQKERLLSWYERYKIIKGIAQAIIYLHEYSRLKIIHRDIKPNNILLYSNMNPKISDFGMARMVAIDKDQGQTNRIVGT* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0558 417 Gene3D Phosphorylase Kinase; domain 1 214 327 - -
Dod06g0558 417 Gene3D Transferase(Phosphotransferase) domain 1 328 417 - -
Dod06g0558 417 ProSiteProfiles Protein kinase domain profile. 252 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0558 417 Gene3D - 5 38 IPR038408 -
Dod06g0558 417 Gene3D - 48 156 IPR038408 -
Dod06g0558 417 ProSitePatterns Serine/Threonine protein kinases active-site signature. 373 385 IPR008271 GO:0004672|GO:0006468
Dod06g0558 417 ProSiteProfiles Gnk2-homologous domain profile. 51 156 IPR002902 -
Dod06g0558 417 Pfam Protein kinase domain 255 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0558 417 SUPERFAMILY Protein kinase-like (PK-like) 234 417 IPR011009 -
Dod06g0558 417 Pfam Salt stress response/antifungal 58 151 IPR002902 -
Dod06g0558 417 ProSitePatterns Protein kinases ATP-binding region signature. 258 280 IPR017441 GO:0005524
Dod06g0558 417 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 7 164 - -
Dod06g0558 417 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 177 417 - -
Dod06g0558 417 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 177 417 - -
Dod06g0558 417 SMART serkin_6 252 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0558 417 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 7 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0558 Dod-Chr6 6701666 6706016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0558 8 417 Receptor kinase-like Gene Family AT4G05200 46.462 3.54e-119 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod06g0558 Pkinase 2.6e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0558 - - lang:109335395 617.846