Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0556 ATGATTGTCAAGACCAAATTTAGCATATTACCATTCTTAGTACTTAGCATCCTTGTACTCTTCGACAGAGAAACCTCAGCCTCTGTGTTCGACTACGTGAACTGCACAAGCAGCAACAATAACACGTTCACTCCAAACAGCACTTTCCACATCAACCTCAACACGCTTCTTTCTTCTCTTTCCAACAAAGTGACAAACCTCAATGTCACGTTCTTCAACGCAACCGCAGGATCCCATGATTGGGATACCGTGTACGGCCTCTTCATGTGCCGCGGCGACGTGCCACTTGCACTGTGCAGAGAGTGCGTTGGTTTCGCAGCACAGAACATAGCCTCGTCGTGTCCCCTGGCAAAAGAGGCAGTGATATGGTACAACGAGTGCTTGTTGCGCTACTCCAATAGGTTGTTCTTCTCTACCATGGATGAATGGCCGAGGTACCAGATCAAGATCCCACTTGGGGACCCTGTGCTTTTGCATAGCCAAGGATTCTACAGTGCATTAAGGTCCATATTCAGTAACCTTGCAAATGAAGCAGCCTTGGCTCTAGGTGGTTCTGATAACCAATTCGCCGTGAAGCAAGCTGAAGCCTCCACCGCCACCACCGTGTACGGCTTCGCTCAGTGCACGCCGGACCTCTCCTCCGGTGAGTGCCGGCGGTGTATCGCTGATGCGGTAGCGGAGTTTCCAAAGTCATGTTGCGGAGGGAGCATAGGGGGAAGTGTCATGTTTCCGAGTTGCGTTGCTAGGTATGAAACGTATCCGTTTTATCAGCATTCCAGTACCTCCGCTCCTACAACAACCACAACTAAGGGAGGAAGAAATAGAGCAGAAGTGATTGCGATCGCTGTTGTCTTAGTTTTCATTTTGGTGATGCTTTTGTGCTTTGGCTACTTTTACCTTCGGATAAAACTGGCGAAGAGACGCAAGGCCAGTCTCAGAAAAAACTTTGGTCCTGAGATTACTACCTTGGAGTCCTTGCAATTTGATTTGGCTACAATTCAAGTAGCCACAAACAAATTTTCTGAAGAGAGCAGGATAGGCAAAGGGGGATACGGAGTAGTCTACAAGGGAATTCTTCCTGGCGGAGAAGAGATAGCCGTAAAGAGGCTCTCAAGAAATTCTGGACAAGGAGCAGAGGAATTCAAAAATGAAGTGTTGTTAATAGCTAAACTTCAACACAGGAATTTGGTGAGATTGATAGGATTTCTGCCTTGA 1215 0.4749 MIVKTKFSILPFLVLSILVLFDRETSASVFDYVNCTSSNNNTFTPNSTFHINLNTLLSSLSNKVTNLNVTFFNATAGSHDWDTVYGLFMCRGDVPLALCRECVGFAAQNIASSCPLAKEAVIWYNECLLRYSNRLFFSTMDEWPRYQIKIPLGDPVLLHSQGFYSALRSIFSNLANEAALALGGSDNQFAVKQAEASTATTVYGFAQCTPDLSSGECRRCIADAVAEFPKSCCGGSIGGSVMFPSCVARYETYPFYQHSSTSAPTTTTTKGGRNRAEVIAIAVVLVFILVMLLCFGYFYLRIKLAKRRKASLRKNFGPEITTLESLQFDLATIQVATNKFSEESRIGKGGYGVVYKGILPGGEEIAVKRLSRNSGQGAEEFKNEVLLIAKLQHRNLVRLIGFLP* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0556 404 Gene3D Phosphorylase Kinase; domain 1 302 403 - -
Dod06g0556 404 ProSiteProfiles Gnk2-homologous domain profile. 145 255 IPR002902 -
Dod06g0556 404 Pfam Protein kinase domain 341 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0556 404 ProSitePatterns Protein kinases ATP-binding region signature. 346 368 IPR017441 GO:0005524
Dod06g0556 404 SUPERFAMILY Protein kinase-like (PK-like) 318 402 IPR011009 -
Dod06g0556 404 Gene3D - 158 255 IPR038408 -
Dod06g0556 404 Gene3D - 30 136 IPR038408 -
Dod06g0556 404 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 10 402 - -
Dod06g0556 404 ProSiteProfiles Gnk2-homologous domain profile. 31 136 IPR002902 -
Dod06g0556 404 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 10 402 - -
Dod06g0556 404 Pfam Salt stress response/antifungal 35 133 IPR002902 -
Dod06g0556 404 Pfam Salt stress response/antifungal 161 253 IPR002902 -
Dod06g0556 404 ProSiteProfiles Protein kinase domain profile. 340 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0556 Dod-Chr6 6659014 6660672 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0556 7 402 Receptor kinase-like Gene Family AT4G05200 38.278 1.45e-83 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod06g0556 Stress-antifung 1.9e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0556 - - gmx:100791642 493.041