Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0545 ATGCATTCCCGCATCAAGATGTCCCTCTTCAACAACCATGCTCTCACCCGTTTTCTGCCAACATGCCTCTTTGTCTTTGCAATGGGATCACTTAGTATCATCATCTCAGCAGCTCCGACATACAACGCAAACTACTGCCCGAACAACGCAACATACGAATCCAACACCATATTCCAAACAAACCTCAGAGTCCTACTCTATTCTCTCAACACCAACGCCACCGCAGGCGCCAGCACCTACGAGTCCAGCATGGGCTTGGGGAGCGTGAACGTCGCCAGCGGCCTCTTCCTCTGCCGCGCTGACGTCTCCTCCGCCACCTGCCAGGACTGCGTCGCCACCGCAGCCGCAGAGATCACGAGCCGCTGCCCCAACAAGACAGAGTCGATCATATGGTACGACGAGTGCATGCTGCGGTACACAAACCGTTACTTCAGCCCCGTGACTGTTTCTCCAGGAGTGAGCCTGCCGGCAGACAAGAACATCACGGCCTCGGAAGTGGACAGTTTTAACCGAACGTTGTTCGGGTTGTTGGACGATTTGGCGGAGCAAACGGCGAATTCCCAGTCGGCGAAGAAGTTCGCCGCTGGGGAAGCGCAGTTCGGCGGGTCTTCGTCGCGGGTGTATGCAATGACGCAGTGCTTGCCGGACTTGACGACCCCGCAGTGTGATGCGTGTCTGGAAGGTGCCATTGGAACACTTCCCGCATGTTGCAGCGGAAATCAAGGTGCACGAGCTCTGCTTTCGTCGTGTAATGTCAGATACGAATTGTACCGGTTTTATAATATTAGTGACACTTCTCCTCCTTCTTCAGGGAATAAGACATCTGGATCACGAATTGCCTTAATCGTTGTCTTTGTTTCCGTTGGGATAATTCTCTTCTGTTTTGTCTGCTATTTCCTACTGAGAAGATCAAAGAAGAATCGTCACACTCTTCTAAGGGAAAATTTTGGGGTTGACAGTGCCACTTTGGAATCATTACAATTCAGTTTGGTCACAATTGAAGCTGCGACAAAGAAGTTTTCAAGTGAAAATTTAATAGGCAAAGGTGGATTCGGAGAGGTTTACAAGGGCATTCTTGTAGATGGACGTGAAATAGCAGTTAAAAAACTCTCACAAAGTTCGGGACAAGGGGTATTAGAATTCAAGAACGAAATCTTACTTATAGCCAAACTCCAACACAGAAATTTAGTGACACTTCTAGGATTTTGTTTGGAAGCACAAGAGAAAGTGTTAATATATGAATTTGTGCCCAATAAAAGCCTTGATTATTTTTTATTTGATGCTTACAAGAGTAGATTGTTGAGATGGTCTGAACGTTACAAAATTATCGAAGGAATCGCACGGGGAATTCTTTATTTACATGAGCATTCACGGTTAAAAGTTATACATCGTGATTTAAAGCCTAGTAATGTGTTGTTGGATAACAACCTGAATCCAAAAATTTCAGATTTTGGCTTAGCAAGAATGATTGCTATAGATCAAGATCGAGGAAAGACAAATAGAATTGTTGGAACATTTGGTTATATGTCACCAGAATATGCAATGCATGGGCAATTTTCAGAAAAGTCAGACGTTTTTAGCTTTGGAGTGATATTACTGGAGATCATTAGTGCAAAAAAGAATGCTCGTTCTTATGTATCATATGATGACCTCTTGACTTATGCTTGGAGACAATGGAGAGATGAAACACCATTGAAAATATTAGACGAAGATATTAAAGAATCTTGCAACCACAGTGAAGTTATTAAGTGCATCCAAATTGGTTTATTATGTGTACAGGACAAGCCAGATCATAGACCTACGATGGCAAATGTTGTTTCGTATCTCAGTAACCCCTTAGCAGAGTTGCCATTTCCGGGAGAACCTACAAATTCTTTGCATAGTGGAATAGTGCAAAATATGGTAGCAGGGGAAACAAGTTCAGGTTCTGCATTCTCAGTCAATGAAATGTCAATCAGTAAATTTATTCCCCGGTAG 1977 0.4411 MHSRIKMSLFNNHALTRFLPTCLFVFAMGSLSIIISAAPTYNANYCPNNATYESNTIFQTNLRVLLYSLNTNATAGASTYESSMGLGSVNVASGLFLCRADVSSATCQDCVATAAAEITSRCPNKTESIIWYDECMLRYTNRYFSPVTVSPGVSLPADKNITASEVDSFNRTLFGLLDDLAEQTANSQSAKKFAAGEAQFGGSSSRVYAMTQCLPDLTTPQCDACLEGAIGTLPACCSGNQGARALLSSCNVRYELYRFYNISDTSPPSSGNKTSGSRIALIVVFVSVGIILFCFVCYFLLRRSKKNRHTLLRENFGVDSATLESLQFSLVTIEAATKKFSSENLIGKGGFGEVYKGILVDGREIAVKKLSQSSGQGVLEFKNEILLIAKLQHRNLVTLLGFCLEAQEKVLIYEFVPNKSLDYFLFDAYKSRLLRWSERYKIIEGIARGILYLHEHSRLKVIHRDLKPSNVLLDNNLNPKISDFGLARMIAIDQDRGKTNRIVGTFGYMSPEYAMHGQFSEKSDVFSFGVILLEIISAKKNARSYVSYDDLLTYAWRQWRDETPLKILDEDIKESCNHSEVIKCIQIGLLCVQDKPDHRPTMANVVSYLSNPLAELPFPGEPTNSLHSGIVQNMVAGETSSGSAFSVNEMSISKFIPR* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0545 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Dod06g0545 658 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 23 658 - -
Dod06g0545 658 ProSiteProfiles Gnk2-homologous domain profile. 40 144 IPR002902 -
Dod06g0545 658 CDD STKc_IRAK 346 609 - -
Dod06g0545 658 Gene3D Phosphorylase Kinase; domain 1 302 415 - -
Dod06g0545 658 Pfam Protein tyrosine and serine/threonine kinase 343 609 IPR001245 GO:0004672|GO:0006468
Dod06g0545 658 ProSiteProfiles Gnk2-homologous domain profile. 149 259 IPR002902 -
Dod06g0545 658 ProSiteProfiles Protein kinase domain profile. 340 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0545 658 Pfam Salt stress response/antifungal 46 141 IPR002902 -
Dod06g0545 658 Pfam Salt stress response/antifungal 164 257 IPR002902 -
Dod06g0545 658 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 23 658 - -
Dod06g0545 658 SMART serkin_6 340 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0545 658 Gene3D - 39 144 IPR038408 -
Dod06g0545 658 Gene3D - 155 259 IPR038408 -
Dod06g0545 658 Gene3D Transferase(Phosphotransferase) domain 1 416 616 - -
Dod06g0545 658 SUPERFAMILY Protein kinase-like (PK-like) 323 623 IPR011009 -
Dod06g0545 658 ProSitePatterns Protein kinases ATP-binding region signature. 346 369 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0545 Dod-Chr6 6583960 6589009 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0545 35 619 Receptor kinase-like Gene Family AT4G05200 47.705 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod06g0545 PK_Tyr_Ser-Thr 3.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0545 - - gsj:114402923 920.228