Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0544 ATGGTTCTCTTCAACAGCCATGTCACCTCTTTTCTGCTCTTATCTCTTCTCGGAATCAGATCGTTTGCCTCAGCATCTCCCACTTACAGCGCCTATTACTGCCCAAACAACGCAACATACCAATCCAGCACCGCATTCCAAAACAACCTTAACCTCCTCATATCTTCTCTCACCTCCAACGCTTCCGAAGGCCGTGATGGCGCCTACCAGACCAACATAGGCTTAGGGACCGCAGATGTCGCCAGTGGCCTCTTCCTATGCCGTGGCGACGTCTCCTACGCCACCTGCGCTGGCTGTGTTGCCACCGCGGCCGAAGACATATCACGGCGCTGCCCCAACCAGACACGGTCCGTCATCTGGTACGATGAGTGCATGTTGGGTTACACAAACCGCTACTTCAACCCTGTCAGCATCGTCCCGAGGGTGAACTTGTGGGATGGAAACAACGTTTCTGACTCGGATTTCGACAGCTTTAACGGAACATTGTTCAGCTTGCTGGACAGTTTGGCTGAGGAAGCTTCGAGTTCCCAGTCTGGCAAGAAATTCGCCACAGATGAACGGAACTATAGTGGCTCCTCGGGGCATACAACGTTGTATGGGTTGGCGCAGTGCGCCCCCAGCTTGACGAATGCTCAGTGTGAGGAGTGTCTGAAGAATGGAATTGGTACTATCCCCATGTGTTGTGGAGGAAAACAAGGTGCCAGAGCTCTGCTTGCATGGTGTTATATTAGATACGAGTCATACAAGTTTTACAACAGCAGTGGGACTTCAGCATCGCCTCTGCTTCCTCCTACTCCTTCAGGAGAAAAGAAATCTGGATCAAAACCAGCTGTCTTGATTGTTGTCATTGTTGGCGTTTTGGCAACTCTTATTTGTTTACTCGGCTATTTTCTACTGAGAAGAGCAGCGAGGAAGACCTATAATACTCTTCTAAGGGAAAATTTTGGGGATGAAAGTGCCACGTTGGAGTCGCTGCAATTTAGTTTGGGAACAATTGAAGCTGCCACGAGTAAGTTTTCATATGAAAACAAAATAGGCAATGGAGGATTCGGAGAGGTTTACAAGGGCATTCTTTCAGATGGAGGGGAAATAGCTGTAAAAAGACTCTCACAAACTTCAGGACAAGGTGTAGTAGAATTCAAGAATGAGATTCTACTAATAGCCAAACTTCAACATAGAAACCTTGTGACTTTGTTAGGATTTTGCTGGGAAGAGCAAGAGAAACTGCTTATTTATGAATTTGTGCCCAACAAAAGCCTCGATTACTTTCTATTTGATCCCCATAAGAGCCGTTCATTGAATTGGTTTGAGCGTTACAAAATTATTCAAGGAATTGCACGTGGAATTCTCTACTTACATGAACATTCACGACTAAAAGTTATACATCGTGATCTTAAACCTAGTAATATATTGTTAGATAACAATATGGATCCAAAGATCTCAGACTTTGGCATGGCAAAGATGGTTGCTCTAGATCAAGAACAAGGAAATACAAATAGAATTGTTGGAACATTGTAA 1518 0.4526 MVLFNSHVTSFLLLSLLGIRSFASASPTYSAYYCPNNATYQSSTAFQNNLNLLISSLTSNASEGRDGAYQTNIGLGTADVASGLFLCRGDVSYATCAGCVATAAEDISRRCPNQTRSVIWYDECMLGYTNRYFNPVSIVPRVNLWDGNNVSDSDFDSFNGTLFSLLDSLAEEASSSQSGKKFATDERNYSGSSGHTTLYGLAQCAPSLTNAQCEECLKNGIGTIPMCCGGKQGARALLAWCYIRYESYKFYNSSGTSASPLLPPTPSGEKKSGSKPAVLIVVIVGVLATLICLLGYFLLRRAARKTYNTLLRENFGDESATLESLQFSLGTIEAATSKFSYENKIGNGGFGEVYKGILSDGGEIAVKRLSQTSGQGVVEFKNEILLIAKLQHRNLVTLLGFCWEEQEKLLIYEFVPNKSLDYFLFDPHKSRSLNWFERYKIIQGIARGILYLHEHSRLKVIHRDLKPSNILLDNNMDPKISDFGMAKMVALDQEQGNTNRIVGTL* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0544 505 ProSitePatterns Protein kinases ATP-binding region signature. 345 367 IPR017441 GO:0005524
Dod06g0544 505 SUPERFAMILY Protein kinase-like (PK-like) 321 504 IPR011009 -
Dod06g0544 505 ProSiteProfiles Gnk2-homologous domain profile. 138 250 IPR002902 -
Dod06g0544 505 Gene3D - 27 133 IPR038408 -
Dod06g0544 505 Gene3D - 141 250 IPR038408 -
Dod06g0544 505 ProSiteProfiles Gnk2-homologous domain profile. 28 133 IPR002902 -
Dod06g0544 505 Gene3D Transferase(Phosphotransferase) domain 1 415 505 - -
Dod06g0544 505 Pfam Salt stress response/antifungal 34 130 IPR002902 -
Dod06g0544 505 Pfam Salt stress response/antifungal 153 248 IPR002902 -
Dod06g0544 505 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 9 504 - -
Dod06g0544 505 ProSiteProfiles Protein kinase domain profile. 339 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0544 505 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 9 504 - -
Dod06g0544 505 Pfam Protein kinase domain 341 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0544 505 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Dod06g0544 505 Gene3D Phosphorylase Kinase; domain 1 302 414 - -
Dod06g0544 505 SMART serkin_6 339 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0544 Dod-Chr6 6580646 6582683 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0544 4 504 Receptor kinase-like Gene Family AT4G05200 45.873 1.14e-145 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod06g0544 Pkinase 6.1e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0544 - - ccaj:109813299 652.899