Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0543 ATGCCTCCGGAATATATAAAGTATGGACACTTTTCAGAAAAATCAGACATTTTTAGTTTTGGAGTTATAGTTCTGGAGGTAATTAGTGCAAAAAAGAACGGTCGCTCACTTGGATCAGGTGAAGATGATGATGACCTCTTGTGCTATGCTTGGAGACTATGCAGGGATGAAACACCATTGAAAATACTAGACCAAGATGTTAAAGAATCCTGCAGTTACAGTGAAGTGATAAAGTGTATCCAAATTGGTTTACTATGTGTCCAACAAAAGCCAGAAGATAGACCTACAATGGCGAAAGTTGTTTCATATCTTAGTAGCCCTTTAGCGGAGTTGCCGTTTCCTGGAGAACCAACAAGATCTATGCATAATAATGGAACAGTGCAAAAGATGGTAGCAGGGGAGTCGAGTTCAGGTTCTACGTTCTCAGTCAATGAAATGTCCGTGAGTAAATTTATTCCACGGTAG 465 0.3978 MPPEYIKYGHFSEKSDIFSFGVIVLEVISAKKNGRSLGSGEDDDDLLCYAWRLCRDETPLKILDQDVKESCSYSEVIKCIQIGLLCVQQKPEDRPTMAKVVSYLSSPLAELPFPGEPTRSMHNNGTVQKMVAGESSSGSTFSVNEMSVSKFIPR* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0543 154 Pfam Protein tyrosine and serine/threonine kinase 1 104 IPR001245 GO:0004672|GO:0006468
Dod06g0543 154 Gene3D Transferase(Phosphotransferase) domain 1 1 133 - -
Dod06g0543 154 SUPERFAMILY Protein kinase-like (PK-like) 1 127 IPR011009 -
Dod06g0543 154 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 1 154 - -
Dod06g0543 154 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 154 - -
Dod06g0543 154 ProSiteProfiles Protein kinase domain profile. 1 109 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0543 Dod-Chr6 6579881 6580430 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0543 1 154 Receptor kinase-like Gene Family AT4G11480 37.736 1.89e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod06g0543 PK_Tyr_Ser-Thr 1.2e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0543 - - lja:Lj0g3v0067799.1 212.616