Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0541 ATGAATCCAAAAATATCAGACTTTGGTATGGCAAGAATGATTGCTATAGAAGAAGACCGAGGAAATACAAAAAGAATTGTTGGAACATATGGTTATATGTCTCCAGAATATGCAATGCATGGACAATTTTCAGAAAAATCAGACGTCTTTAGTTTTGGAGTCATAATGTTGGAGATAATTAGTGCAAAAAGGAATGCTCGATCTCTTTTATCCAGCAATGATGATGACCTCTTGAGTCATGCTTGGAGACAATGGAGGGCTGAGACACCATTAAAAATATTAGACAAAGATATAAAAGAATCTTCCAATCACGGTGAAGTCATTAAGTGCATCAAAATTGCTTTACTATGTATCCAAGAAAAACCAGATGATAGACCTACAATGGCAAGAGTTGTTTCATATCTCAGTAGTCCTTTAGCTGAGCTGCCACATCCCGGAGAATCGTCAAATTCTATACATAATGAAATATTGCAAAAGATTGTACAGGGGATCGAGTTGAGATCAGGTTCTACATTCTCAGTCAACGAAATTTCTGATTAA 540 0.3593 MNPKISDFGMARMIAIEEDRGNTKRIVGTYGYMSPEYAMHGQFSEKSDVFSFGVIMLEIISAKRNARSLLSSNDDDLLSHAWRQWRAETPLKILDKDIKESSNHGEVIKCIKIALLCIQEKPDDRPTMARVVSYLSSPLAELPHPGESSNSIHNEILQKIVQGIELRSGSTFSVNEISD* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0541 179 Gene3D Transferase(Phosphotransferase) domain 1 1 158 - -
Dod06g0541 179 ProSiteProfiles Protein kinase domain profile. 1 140 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0541 179 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 158 - -
Dod06g0541 179 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 1 158 - -
Dod06g0541 179 Pfam Protein tyrosine and serine/threonine kinase 4 135 IPR001245 GO:0004672|GO:0006468
Dod06g0541 179 SUPERFAMILY Protein kinase-like (PK-like) 1 144 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0541 Dod-Chr6 6572310 6573688 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0541 1 147 Receptor kinase-like Gene Family AT4G23150 52.381 3.41e-51 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod06g0541 PK_Tyr_Ser-Thr 2e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0541 - - ccaj:109813299 274.633