Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0537 ATGCTCTCCAATGAACAAGAAATTGCAGTCAAAAGATTGTCTAAGAGTTCTGGCCAAGGAGATATTGAATTCAAGAATGAAGTGCAATTAATGACCAGGCTTCAACATCGAAATTTGGTTAGGCTTCTTGGTTTTTGTTTTGAAAGAGAAGAACGGTTACTTGTCTATGAGTTTCTTCCCCATAAAAGCCTTGACTACTTCTTGTTTGATCCAATTAAACGAGCACATTTGAATTGGAAAACACGCTACAAGATAATTGAAGGAACTGCATATGGCCTTCTTTACCTTCATGAGGATTCTCAACAAAGAATTATTCACCGAGATCTAAAATCCAGTAATATTCTTTTAGATGCAGATATGAACCCTAAGATTTCAGATTTTGGTTTGGCAAGGCTATTTGATTTAGATCAAACTCAAGCTATTGCAAGTAAAATTGTGGGAACCTTGTGA 450 0.3578 MLSNEQEIAVKRLSKSSGQGDIEFKNEVQLMTRLQHRNLVRLLGFCFEREERLLVYEFLPHKSLDYFLFDPIKRAHLNWKTRYKIIEGTAYGLLYLHEDSQQRIIHRDLKSSNILLDADMNPKISDFGLARLFDLDQTQAIASKIVGTL* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0537 149 ProSitePatterns Serine/Threonine protein kinases active-site signature. 104 116 IPR008271 GO:0004672|GO:0006468
Dod06g0537 149 SUPERFAMILY Protein kinase-like (PK-like) 4 148 IPR011009 -
Dod06g0537 149 Pfam Protein tyrosine and serine/threonine kinase 4 138 IPR001245 GO:0004672|GO:0006468
Dod06g0537 149 SMART serkin_6 1 146 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0537 149 Gene3D Transferase(Phosphotransferase) domain 1 59 149 - -
Dod06g0537 149 PANTHER PROTEIN, PUTATIVE ISOFORM 1-RELATED 2 148 - -
Dod06g0537 149 ProSiteProfiles Protein kinase domain profile. 1 149 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0537 149 Gene3D Phosphorylase Kinase; domain 1 1 58 - -
Dod06g0537 149 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 2 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0537 Dod-Chr6 6533910 6534502 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0537 2 148 Receptor kinase-like Gene Family AT4G04570 68.027 4.96e-71 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod06g0537 PK_Tyr_Ser-Thr 2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0537 - - gsj:114402114 256.144