Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0536 ATGAAACACACACACACACATACAAAACCTAGACTACCCCCTGGAGCTGCGGTCTTCCCCCTTACAATAGCACCTCTTCATCTTTTTTTTTTCTTCCAAAGGAGCAGAAAAAAAGCAGAAAGCAGAAGGTGTTCGCGTAGAAGCGAAGCAGAAGCCGTTCATACGGAAGCAGAAGCCATTCGCACAGAAGCAGAAGCAAAAGCTAGTCCGCGCAGAAGCAGATCCGAAAAGAAGTGGTGGTGGACTCATAGAGGCAGAATCGTGGAAGCAGAATACGCGGCTACTGGTGAACCTTCCCCTTTCACGCTCTTATCTCACGGTTGCTTCCTTTCTTTCGTTTTTTTCAAGTCTGAAAATATTGAGCTATGGGTGGAGTTGATGTGCTTGACTTGTTTTGGTGAGGTTGAGTCCTTGAAGCCTAAAGCTTGGATGTATGAATCAAACCAAGTGATGGCTTGGCGTGATAGGATGAAGATTGTGGCAAGCACTGCAAAAGGCTTGAGATTCCTCCATGAAAATTGCCGAGTAGGTTGCATTGTACACCAAGACTTAAGACCAAGCAACATTCTTCTCGCTCATGACTTTGAGCCTATGATTGGAGATTTTGGTCTTTCAAGATGGCAACTTAATGCTCAATTAGTTGAGGAGACACATCTAGTTGGTACATTTGGGTAA 675 0.4474 MKHTHTHTKPRLPPGAAVFPLTIAPLHLFFFFQRSRKKAESRRCSRRSEAEAVHTEAEAIRTEAEAKASPRRSRSEKKWWWTHRGRIVEAEYAATGEPSPFTLLSHGCFLSFVFFKSENIELWVELMCLTCFGEVESLKPKAWMYESNQVMAWRDRMKIVASTAKGLRFLHENCRVGCIVHQDLRPSNILLAHDFEPMIGDFGLSRWQLNAQLVEETHLVGTFG* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0536 224 ProSiteProfiles Protein kinase domain profile. 1 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0536 224 PANTHER CONCANAVALIN A-LIKE LECTIN/GLUCANASE DOMAIN-CONTAINING PROTEIN-RELATED 123 224 - -
Dod06g0536 224 PANTHER OS01G0253100 PROTEIN 123 224 IPR045271 GO:0004714|GO:0006468
Dod06g0536 224 ProSitePatterns Tyrosine protein kinases specific active-site signature. 179 191 IPR008266 GO:0004672|GO:0006468
Dod06g0536 224 Pfam Protein kinase domain 145 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0536 224 SUPERFAMILY Protein kinase-like (PK-like) 114 223 IPR011009 -
Dod06g0536 224 Gene3D Transferase(Phosphotransferase) domain 1 104 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0536 Dod-Chr6 6502230 6505450 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0536 144 224 Trihelix Transcription Factor Family AT1G68690 40.741 3.81e-15 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Dod06g0536 Pkinase 4.1e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0536 - - aprc:113871668 135.961