Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0534 ATGGAATGTCCCACCTGGGATTCTGAATCTCTGATTTGTGCAGGAAAGAGCAACACATCACGAATTGTCGTCGCCATAACAGTACCAGTTGTTGTCTTTAACCCTATTCCCCCTTGCGAAGCTGAAGATGATGATGATGAAATTATAGCCAATGAATCATTTCAATTTGACTTCGATACCATACGAGTTGCTACAGGAGATTTCTCAGATTCTAATAAACTAGGACAAGGCGGATTTGGAGCTGTTTATAAGGGTAGGCTTTCCGATGGACAAATGATTGCAGTCAAAGTTAAGCTACTTGGCTTTTGTTTGGAAGGAAGCGAAAGGTTACTTGTTTATGAATTTGTTCCAAATAAAAGCCTTGACTACTTCATATTTGATCCAATCAAGAAAGGACAACTAAATTGGATGATGCGGTACAAAATCATTGAAGGTGTTGCTAGAGCCCTTCTTTACCTTCACGAGAATTCTAGACTACGCATTATATACCATGATCTCAAAGCAAGCAACATTCTCTTGGATAAAGAGATGAATCCCAAGATATCTGATTTTGGCTTAGCAAAACTATTTGTTGTGGATCAAACCCAAGGAAATACAAGCAGAATTGCTGGAACATATGGATATATGACACCTGAATATGCAGTGTATGGAAACTTTTCGATGAAGTCCGATGTCTTTAGTTTTGGTGTATTGGTTCTTGAAATTGTGAGTGGCCAGAAACACAGTGGCATTCGTCATGGAGAGAATGTGGAGGATCTACTAAGCTTTGTAAGTCTTCCTTTTCCCACTAGTACATCTCCATTGCCGTCCAAAGTTTGGCTTGAAGGTTATGCATGCGCTCTTAAACACCAGTATATTGTTACAAGTGGAATTAGTGAACTTAATAGCATCTGCAATTGGCCAAATTCTTGCAGGTGTGGAGAAACTGGAGGGATGGGACTGCAACAAATATTATAG 957 0.395 MECPTWDSESLICAGKSNTSRIVVAITVPVVVFNPIPPCEAEDDDDEIIANESFQFDFDTIRVATGDFSDSNKLGQGGFGAVYKGRLSDGQMIAVKVKLLGFCLEGSERLLVYEFVPNKSLDYFIFDPIKKGQLNWMMRYKIIEGVARALLYLHENSRLRIIYHDLKASNILLDKEMNPKISDFGLAKLFVVDQTQGNTSRIAGTYGYMTPEYAVYGNFSMKSDVFSFGVLVLEIVSGQKHSGIRHGENVEDLLSFVSLPFPTSTSPLPSKVWLEGYACALKHQYIVTSGISELNSICNWPNSCRCGETGGMGLQQIL* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0534 318 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 97 257 - -
Dod06g0534 318 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 11 96 - -
Dod06g0534 318 Gene3D Transferase(Phosphotransferase) domain 1 116 275 - -
Dod06g0534 318 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Dod06g0534 318 Gene3D Phosphorylase Kinase; domain 1 39 97 - -
Dod06g0534 318 ProSiteProfiles Protein kinase domain profile. 68 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0534 318 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 97 257 - -
Dod06g0534 318 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 11 96 - -
Dod06g0534 318 Pfam Protein kinase domain 97 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0534 318 SUPERFAMILY Protein kinase-like (PK-like) 52 267 IPR011009 -
Dod06g0534 318 ProSitePatterns Protein kinases ATP-binding region signature. 74 96 IPR017441 GO:0005524
Dod06g0534 318 SMART serkin_6 68 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0534 Dod-Chr6 6458832 6461334 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0534 4 244 Receptor kinase-like Gene Family AT4G23190 53.147 2.33e-92 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod06g0534 Pkinase 1.2e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0534 - - gmx:100305371 344.739