Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0533 ATGCATCTGAGGCATAAATATTCCGTGTGTTACTTGTGTGATTCCTGGAGGCTTAAGCATATGATGATGGTGGTTGTTTCTATAAGGTTGTTTACCTATCTTTGTTGTCTCCTTTCCATAATCATACCTCAAGCCCGCGCCCAGCAATTTAGTTTCCTAAATGCCACATGTGCAGATAATAGAGGTTATTACACAGCCAATAGCACCTACAACCTCAATCTTATGACCGTCTTGACCAATCTCACATCCATCGCAAAAAATGATTACGGTTTCTACAATTCTTCGTATGGCCACAACGCCGATAAAGTAAATGCCCTTGGGATGTGCAGAGGAGATGTAAAGCCAGATGATTGTCGCCGTTGCCTTATGGATGCCATGGCCCTTCTCACGCAGCTTTGTCTAAATCAGAAGGAGGCAATTGGATGGCATGACAATTGCATGCTGCGCTACTCGAATCGATCCATATTTGGGGTCGTAGATACTTCACCTACGTTTTATTTATGGAACCCATCTGATGCATATGAGGTGGATCAGTACAATCAAGTGGTACAAAACTTGACGAACACGTTAAGAATCACAGCCGAAGTAGGTGATTATCGTCGCAAATATGCCACAGCAAACGTAAGTGGTCCAAGGTTTCAACACATATATGGCCTTGCGCAGTGCACGCCTGATCTGTCTGGCCGACAATGCGATGATTGCTTGGTTAAGGCTATCTCAGAAATCCCAACTTGTTGTAATAACAAGAAAGGTGGAAGGGTTCTTAAACCCAGTTGCAATATTAGATATGAATCCTACTCCTTCTTTGGACCTACTGCAGATGAACCACTACCATCACCTTCACCGTCACCAGTCACATCACCACTACCTTCCCCAGTCACCAATAACACTTCCTCAAAAGGTCAAGGAAAAGGCAACACGTCTCGAACTGCCATCGCCATAGCAGTGCCAACAGCTGTTGTTGCATTGGTGCCGAGTATCATATGCCTCTATTTACGGATGAGGAAGTCAAAGGAAAATTCTGACGTTGAGGGTGTTGAAGACGAAATTATAGCCAATGAGTCATTCCAGTTCGACCTTGATACCATACAAGTTGCTACAAGTGATTTCTCAGATTCTAACAAACTTGGACAAGGTGGATTTGGAACTGTTTATTGGGGTAGGCTTTCCAATGGACAAATGATTGCTGTCAAAAGGTTGTCAAGGGACTCAGGCCAAGGAGCAACAGAATTTAAGAATGAAGTGCTTTTATTGGCCAAGCTTCAACACCGAAATTTAGTTAAGCTGCTTGGATTTTGTTTGGAAGGAAATGAAAGGTTACTTGTTTATGAATTTGTTCCTAATAAAAGCCTTGATTACTTCATATTTGATCCAATCAAGAAGGGAGAATTGGATTGGATAAAGCGCTACAAAATTATTGGAGGTGTTGCTCGAGGCCTTCTTTATCTTCATGAGGATTCTAGACTACGCATTATACATCGTGATCTCAAAGCAAGTAACATTCTCTTAGATGAAGAAATGAATCCTAAGATATCGGATTTTGGCTTAGCAAAATTGTTTATTGTGGATCAAACTCAAGGAAGTACAAGTAAAATCATTGGAACACACGGATATATGGCTCCTGAGTATGCAATGCATGGATTATTTTCAGTGAAATCAGATGTTTTTAGTTTTGGTGTGTTAGTTCTTGAAATTGTTAGTGGCCAGACAAATAATGGCATTCACCATGGCGAGAATATGGAGGAGTTACTAAGCTTTGTGTGGAGAAACTGGAGTGAGGGAACAGCTACAAATATTATAGATCCATCATTAAATAACAGTTCACGAAATGAAATGTTGAGGTGTATACATATTGGTTTGCTCTGTGTTCAAGAAAATTTAGCTGACAGACCAACCATGGCTTCTGTTGTACTGATGCTCAATAGTTATTCTTTCACTCTCCCAAGACCTTTGCAACCTGCATTCCTTTTGGATGGTAGAAGTAGAGGGCTACTATTTCCAGACATGCAGTCAAGGGAGTACAATTCAAGGGCAACAACAAGTGAATCAACAATTAGATCAGTTCAAGAGTCAAAAAATGAGGCTTCCATCACTGAGTTATATCCTCGATAA 2112 0.4096 MHLRHKYSVCYLCDSWRLKHMMMVVVSIRLFTYLCCLLSIIIPQARAQQFSFLNATCADNRGYYTANSTYNLNLMTVLTNLTSIAKNDYGFYNSSYGHNADKVNALGMCRGDVKPDDCRRCLMDAMALLTQLCLNQKEAIGWHDNCMLRYSNRSIFGVVDTSPTFYLWNPSDAYEVDQYNQVVQNLTNTLRITAEVGDYRRKYATANVSGPRFQHIYGLAQCTPDLSGRQCDDCLVKAISEIPTCCNNKKGGRVLKPSCNIRYESYSFFGPTADEPLPSPSPSPVTSPLPSPVTNNTSSKGQGKGNTSRTAIAIAVPTAVVALVPSIICLYLRMRKSKENSDVEGVEDEIIANESFQFDLDTIQVATSDFSDSNKLGQGGFGTVYWGRLSNGQMIAVKRLSRDSGQGATEFKNEVLLLAKLQHRNLVKLLGFCLEGNERLLVYEFVPNKSLDYFIFDPIKKGELDWIKRYKIIGGVARGLLYLHEDSRLRIIHRDLKASNILLDEEMNPKISDFGLAKLFIVDQTQGSTSKIIGTHGYMAPEYAMHGLFSVKSDVFSFGVLVLEIVSGQTNNGIHHGENMEELLSFVWRNWSEGTATNIIDPSLNNSSRNEMLRCIHIGLLCVQENLADRPTMASVVLMLNSYSFTLPRPLQPAFLLDGRSRGLLFPDMQSREYNSRATTSESTIRSVQESKNEASITELYPR* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0533 703 CDD STKc_IRAK 376 641 - -
Dod06g0533 703 ProSiteProfiles Gnk2-homologous domain profile. 52 155 IPR002902 -
Dod06g0533 703 ProSitePatterns Protein kinases ATP-binding region signature. 376 398 IPR017441 GO:0005524
Dod06g0533 703 MobiDBLite consensus disorder prediction 290 306 - -
Dod06g0533 703 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 27 686 - -
Dod06g0533 703 Pfam Salt stress response/antifungal 57 152 IPR002902 -
Dod06g0533 703 Pfam Salt stress response/antifungal 176 266 IPR002902 -
Dod06g0533 703 ProSiteProfiles Protein kinase domain profile. 370 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0533 703 ProSitePatterns Serine/Threonine protein kinases active-site signature. 491 503 IPR008271 GO:0004672|GO:0006468
Dod06g0533 703 Gene3D Transferase(Phosphotransferase) domain 1 446 646 - -
Dod06g0533 703 SMART serkin_6 370 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0533 703 SUPERFAMILY Protein kinase-like (PK-like) 356 665 IPR011009 -
Dod06g0533 703 Gene3D Phosphorylase Kinase; domain 1 331 445 - -
Dod06g0533 703 MobiDBLite consensus disorder prediction 675 696 - -
Dod06g0533 703 MobiDBLite consensus disorder prediction 273 306 - -
Dod06g0533 703 MobiDBLite consensus disorder prediction 675 703 - -
Dod06g0533 703 ProSiteProfiles Gnk2-homologous domain profile. 161 268 IPR002902 -
Dod06g0533 703 MobiDBLite consensus disorder prediction 275 289 - -
Dod06g0533 703 Gene3D - 161 268 IPR038408 -
Dod06g0533 703 Gene3D - 50 154 IPR038408 -
Dod06g0533 703 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 27 686 - -
Dod06g0533 703 Pfam Protein tyrosine and serine/threonine kinase 373 637 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0533 Dod-Chr6 6426187 6438491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0533 28 703 Receptor kinase-like Gene Family AT4G21410 50.215 0.0 639
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod06g0533 PK_Tyr_Ser-Thr 5.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0533 - - gmx:100791056 871.692