Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0508 ATGTCCCCATCGCCGGACCGTTCCGCCGCCTGTAGCTTGCTGTGCGGCGAAGACGCCGACGAAGCGATCTCCGACCACCCATCTCCGTCGTCACAGCCAATCCTCTGGCCGCCGCCCGATGAGTCCCGCATCGCCGAGCTCATCGACTCAGAGTCCAGCCACATGCCGGAGCCAGGGTACCTCCGGCGATGCCGCGACCGTGTGGTGGACATCACCGCACGGCTGGACGCCATCAACTATATCTTAAAGGTGCAGGCATTCTATCAGTTCCAGCCTGTCACTGCGTTTCTGTCCATCAACTACATGGACCGTTTCCTGTCCCGCTCCTCTCTTACGAGATCATCAAGTGGGTGGGCGTTTCAGCTGCTATCAGTGGCGTGTTTGTCTGTAGCGGCGAAAATGGAGGAGCCGCAAGTGCCCCTCTTGCCGGACCTGCAGGTGTTGGAGCCCAGGTTCGTGTTCGAACCCAAAACCCTTCAGAGGATGGAGCTCTGGCTCATGTCCAACCTCAACTGGACACTCCGCTCTGTTACCCCCTTCGATTACCTTCATTACTTCTTCAACAACCTCCCTTCTTCCTCTTCCGCCACACAGCACCAATCTATGAAGCGGTTATTCTGCACAGCCTCCGACCTCATCCTCGCTACCACCCGTGTGATTGACTTCTTGGCGTTCGCACCGTCCACCGTGGCTGCTGCCGCCGTCCTCTGCTCCGCTGGCCACGCCCAATCGCCGTTCTGTTTCCACCACAGAGTAAACGATGAAATGGTGAGACGCTGTCACCAGCTAATGGAGGAGTACGTGGTGGACACGTGTCCCGCATCTATCCACAAAGCCACGAGATCCGAGCCGCCGCCGCCTCCGCCGCCTCCGCCGCCACCTCAGAGCCCCGTCGGCGTTCTGGACGCCGCCACGTGTGTCAGCTGCGACACGCGCTCTGACAGGAACTACCTCGGCTCAACCGCCGAATTACAACCCCAAGCCGAAGCCGAAGCCGAGCCGTCAAACAAGCGGCTCCGATCCTCTGCTCCGGAAGTACAGCAGCGGTAG 1050 0.6 MSPSPDRSAACSLLCGEDADEAISDHPSPSSQPILWPPPDESRIAELIDSESSHMPEPGYLRRCRDRVVDITARLDAINYILKVQAFYQFQPVTAFLSINYMDRFLSRSSLTRSSSGWAFQLLSVACLSVAAKMEEPQVPLLPDLQVLEPRFVFEPKTLQRMELWLMSNLNWTLRSVTPFDYLHYFFNNLPSSSSATQHQSMKRLFCTASDLILATTRVIDFLAFAPSTVAAAAVLCSAGHAQSPFCFHHRVNDEMVRRCHQLMEEYVVDTCPASIHKATRSEPPPPPPPPPPPQSPVGVLDAATCVSCDTRSDRNYLGSTAELQPQAEAEAEPSNKRLRSSAPEVQQR* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0508 349 MobiDBLite consensus disorder prediction 280 298 - -
Dod06g0508 349 Gene3D - 57 175 - -
Dod06g0508 349 MobiDBLite consensus disorder prediction 277 300 - -
Dod06g0508 349 Gene3D - 45 275 - -
Dod06g0508 349 SUPERFAMILY Cyclin-like 32 174 IPR036915 -
Dod06g0508 349 CDD CYCLIN 74 164 IPR013763 -
Dod06g0508 349 SMART Cyclin_C_2 177 293 IPR004367 -
Dod06g0508 349 MobiDBLite consensus disorder prediction 320 349 - -
Dod06g0508 349 Pfam Cyclin, C-terminal domain 177 274 IPR004367 -
Dod06g0508 349 PANTHER CYCLINS 27 322 IPR039361 -
Dod06g0508 349 ProSitePatterns Cyclins signature. 74 105 IPR006671 -
Dod06g0508 349 SMART cyclin_7 79 168 IPR013763 -
Dod06g0508 349 PANTHER CYCLIN-D2-1-LIKE 27 322 - -
Dod06g0508 349 Pfam Cyclin, N-terminal domain 46 174 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0508 Dod-Chr6 6133051 6135438 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0508 13 271 Core Cell Cycle Gene Families AT1G70210 40.293 2.39e-57 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0508 K18810 - gmx:100776178 387.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0508 06 6133051 6135438 Dod06g0508 06 6133051 6135438 ECH