Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0494 ATGGAACCTTCTCAGCTGATTTGTGAAGAATGGGGTTCTCTTAGTGGACTGTACACAGCTGAGGAAGCTGATTTTATGACTCAGTTGCTTGCTGGCAACTATTCTGTCTCAGAGAAGCAGTGTGTAAATTCCAGTGTTGGCATGCCATCTGCTTTTTGGCCTGGCCATGAATCCACAGAAGTGAGCTTGACAGGCACCAATAGCAACTCATATTTGCCTTCAAATATTGCAAATACTAACTACTTATGTTTCTCCCAAGGGAGTAGCTCCAGCACTGATAGTGGTAATGTCTTTTCCACTACAAGTAGGGGAAGTTACTCCTGTGAGACAGCAACAAACTTGGACTCCATGTCCCAGGGTTATTGCTTTGGGGAATCCAAATTTAGTCCACATGGTTTTCAATGTAATGAAAACTTAAGGCAACAGATCAATAAAATTACTGATGAAAAGTCAGGTCTTGATCAAGGGAAATCGGATCTTGCTGACAACTTCTTGCAGGCTAAGAGGGAGTATGAAAGGATGGTATTTGAACCTGCAGAAGAGGCTAGAAGCATAAATCAAGAGAACACAGCAAAAAGGCTTAGGAGCTCATTTGAGGTCTCAACAAATATGAGGACTATTAAATCAAGGAAGGAGAATCCAATACTTGCCTCTATGACCAACAACGAAGAGACTAGAAGTGTTTGTCTGGAGCTACATGGAGGGGCATCTTCAAATCTAAGCACAAAAGGCCCTTCAGCTCCCAGTTTAGACAGAAGAGCTAGCAATGGTGCTGCCACTGATCCACAGAGTCTTTATGCAAGAAAAAGAAGAGAAAGGATAAATGAAAGGTTGAGAATGCTGCAAACACTTGTCCCCAATGGAACTAAGGTGGATATCAGCACCATGCTTGAGGAAGCTGTCCAGTACGTGAAATTTTTACAACTCCAAATTAAGCTTCTGAGCTCTGATGACCTATGGATGTATGCGCCCATTGCTTTCAATGGAATGAACATTGGACTAGACCTCCCCATTACTCCTCCAACCAAAGGAAGATGA 1038 0.4268 MEPSQLICEEWGSLSGLYTAEEADFMTQLLAGNYSVSEKQCVNSSVGMPSAFWPGHESTEVSLTGTNSNSYLPSNIANTNYLCFSQGSSSSTDSGNVFSTTSRGSYSCETATNLDSMSQGYCFGESKFSPHGFQCNENLRQQINKITDEKSGLDQGKSDLADNFLQAKREYERMVFEPAEEARSINQENTAKRLRSSFEVSTNMRTIKSRKENPILASMTNNEETRSVCLELHGGASSNLSTKGPSAPSLDRRASNGAATDPQSLYARKRRERINERLRMLQTLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAFNGMNIGLDLPITPPTKGR* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0494 345 Gene3D - 259 315 IPR036638 GO:0046983
Dod06g0494 345 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 7 339 - -
Dod06g0494 345 SMART finulus 264 313 IPR011598 GO:0046983
Dod06g0494 345 Coils Coil 136 156 - -
Dod06g0494 345 CDD bHLH_AtIND_like 259 321 - -
Dod06g0494 345 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 261 324 IPR036638 GO:0046983
Dod06g0494 345 PANTHER TRANSCRIPTION FACTOR BHLH54 7 339 - -
Dod06g0494 345 Pfam Helix-loop-helix DNA-binding domain 268 308 IPR011598 GO:0046983
Dod06g0494 345 MobiDBLite consensus disorder prediction 236 263 - -
Dod06g0494 345 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 258 307 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0494 Dod-Chr6 6029246 6030914 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0494 10 337 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 37.802 4.54e-53 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dod06g0494 HLH 9.9e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0494 - - gmx:100816788 401.749