Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0485 ATGAGCTGCAACGGTTGTCGTGTCCTCCGGAAAGGATGCAGCGAGGACTGCATGCTACGACATTGCCTGATGAGGATACAGAACCCACAAGCACAGGCTCACGCCACCATCCTTGTCGCCAAGTTCTTTGGCCGTGTGCCGCCCTCATGTCTTTCCTTTCCTCCGTATCCACTAACCAAGGATCTGGTGGGGCGCACCATAAATCTAGTGAATGGGGCAGTGGGGCTGCTCTGGACTGCCAACTGGCACCTCTGCAGTCGAGCAAGTGCTCCGAGGCGGTCATGTCGAGTTGACTCCACTGCCTCATGA 309 0.5663 MSCNGCRVLRKGCSEDCMLRHCLMRIQNPQAQAHATILVAKFFGRVPPSCLSFPPYPLTKDLVGRTINLVNGAVGLLWTANWHLCSRASAPRRSCRVDSTAS* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0485 102 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 86 - -
Dod06g0485 102 Pfam Lateral organ boundaries (LOB) domain 2 45 IPR004883 -
Dod06g0485 102 PANTHER LOB DOMAIN PROTEIN 1 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0485 Dod-Chr6 5937736 5938669 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0485 1 88 AS2 family AT3G49940 56.701 3.04e-31 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dod06g0485 LOB 1.8e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0485 - - gmx:100803780 125.561