Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0483 ATGGGTCACTCCAACGTTTGGAGCTCTCACCCTAAGAACTACGGTCCTGGTTCTCGCACCTGCCGTGTGTGTGGGAACCCTCATGGATTGATCAGGAAGTATGGCCTCATGTGTTGCAGGCAGTGCTTCCGCAGCAACGCCAAGGAAATTGGCTTCATCAAGGTAAAACATACATTTGAATGTGCTGATCCCAGTTGTAGCCTTCTAACTAAAATCTAG 219 0.4886 MGHSNVWSSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKVKHTFECADPSCSLLTKI* 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0483 72 Hamap 30S ribosomal protein S14 type Z [rpsZ]. 2 57 IPR023676 GO:0003723|GO:0003735|GO:0006412|GO:0015935
Dod06g0483 72 Pfam Ribosomal protein S14p/S29e 7 54 IPR001209 GO:0003735|GO:0005840|GO:0006412
Dod06g0483 72 Gene3D 30s Ribosomal Protein S14; Chain N 1 56 IPR043140 -
Dod06g0483 72 PANTHER 40S RIBOSOMAL PROTEIN S29 1 54 IPR039744 GO:0003735|GO:0008270
Dod06g0483 72 PANTHER 40S RIBOSOMAL PROTEIN S29 1 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0483 Dod-Chr6 5920653 5923076 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0483 1 56 Cytoplasmic Ribosomal Protein Gene Family AT4G33865 87.500 1.05e-32 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0483 K02980 - gmx:100790389 125.176