Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0476 ATGCTGCGCTGCTGCTACAGCCCCCTTGATTACTGCTTCCGGCGCGGCGGCGGTGACAGGCTCCTCTGGCAGACGGACCTCAAGCCTCACGCGTCCGGCGACTTCTCCATCGCGGTGGCTCAGGCCAATTACAGCCTCGAAGATCAGAGCCAAGTGTTCACCTCCCCATCCGCCACCTACATCGGCGTCTACGACGGCCACGGCGGCCCCGAAGCTTCTAGATTCGTCAACAAGCGTCTCTTACCTTATTTGCACAAGTTTGCCTCTGAACAAGGGGGTTTATCTGTGGATGTCATAAAGAAGGCTTTTAGTGCAACTGAGGAGGAGTTCTTGCATTTGGTGAAGGTGTCGTTGCCCGTGAGTCCTCAGATTGCATCAGTAGGATCGTGTTGCCTTCTTGGTGCGATCTCTGATAATGTGTTGTATGTTGCCAACCTCGGAGACTCCAGAGCTGTTCTTGGAAGGAGGGATACAGAGAACAAGAATTGTCCTGTGGTGGCGGAGCGGTTGTCCACAGATCATAATGTAGCTGATGAGGAGGTGAGGAGAGAAGTTGAGGCCCTCCACCCTGATGATTCACACATTGTGGTTTATACCCGCGGAGTTTGGAGGATTAAGGGAATTATACAGGTGTCAAGATCTATTGGTGATGTGTACTTGAAGAAACCTGATTTCCACAGAGACCCACTTTTTCAGCAATTTGGGAATCCTGTTCCCTTGAAACGTCCTGTAATCACAGCTGAACCATCAATCATTATTAGGGACCTTGAATCAGAAGATTTATTTCTGATATTTGCTTCAGATGGTCTATGGGAACAATTAAGTGATGAAGCAGCAGTTGAGATTGTTTTCAAATATCCAAGAGCTGGAATTGCCAAGAGACTAGTGAGAGCTGCTCTTCAGGAAGCCGCGCAGAAGAGAGAGATGAGATATGATGATATAAAGAAAATTGACAAAGGGATAAGACGACACTTTCATGATGATATCACTGTTGTTGTAATCTATCTTGATCACCATGAGGGCTCCTCTAATGCTAGGCTTAAGCAAACTGCTGTTGGCTGTACAACTGCCCCTGTTGATATTTTCTCCTTAAATGCGGATGAAGCAGAGAAGAGTATGCTTGGTACACTTGCATAA 1137 0.4758 MLRCCYSPLDYCFRRGGGDRLLWQTDLKPHASGDFSIAVAQANYSLEDQSQVFTSPSATYIGVYDGHGGPEASRFVNKRLLPYLHKFASEQGGLSVDVIKKAFSATEEEFLHLVKVSLPVSPQIASVGSCCLLGAISDNVLYVANLGDSRAVLGRRDTENKNCPVVAERLSTDHNVADEEVRREVEALHPDDSHIVVYTRGVWRIKGIIQVSRSIGDVYLKKPDFHRDPLFQQFGNPVPLKRPVITAEPSIIIRDLESEDLFLIFASDGLWEQLSDEAAVEIVFKYPRAGIAKRLVRAALQEAAQKREMRYDDIKKIDKGIRRHFHDDITVVVIYLDHHEGSSNARLKQTAVGCTTAPVDIFSLNADEAEKSMLGTLA* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0476 378 Gene3D - 24 346 IPR036457 -
Dod06g0476 378 PANTHER ALPHABET, ISOFORM E-RELATED 4 373 - -
Dod06g0476 378 PANTHER PROTEIN PHOSPHATASE 2C 63-RELATED 4 373 - -
Dod06g0476 378 CDD PP2Cc 47 336 IPR001932 -
Dod06g0476 378 SUPERFAMILY PP2C-like 43 338 IPR036457 -
Dod06g0476 378 ProSitePatterns PPM-type phosphatase domain signature. 60 68 IPR000222 GO:0043169
Dod06g0476 378 SMART PP2C_4 28 334 IPR001932 -
Dod06g0476 378 Pfam Protein phosphatase 2C 55 304 IPR001932 -
Dod06g0476 378 ProSiteProfiles PPM-type phosphatase domain profile. 34 336 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0476 Dod-Chr6 5862092 5864193 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0476 16 343 PP2C-type Phosphatase Gene Family AT3G51370 57.440 7.20e-140 401
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0476 06 5862092 5864193 Dod06g0476 06 5862092 5864193 ECH
Dod06g0476 06 5862092 5864193 Dod02g0766 02 9976822 9981438 ECH
Dod02g0766 02 9976822 9981438 Dod06g0476 06 5862092 5864193 PCT