Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0466 ATGACTAGTCAAACTGGAAGGTTGACAAGCCATAACGACAGGACGTCCGGAGAGATGCATACACTTGAAGCTGGAACTGAACAACATGAATTGTCAGAAAAAACACAACAGATAGGAACTGAATGTTTAGACAACGAAAAAAGCGTGCCTGCCACTGTATTAACCAGCTCTGTTATTGATGAACAATCAAATCAAGATTCTGACAAAATGACAGAGAGTTCTGTTATTCTACTTCCTGCGCCACCGCAACAAGATTTAGAGAAGAGTTGTCAGCCTGTGGAAGGTTCATGCCTTCAACAAAGTACCCTAGAACAAGTCCATGTTCATTTATCTAATGATAAATCAGAAAACCAATCTCAGACATTCTCTCAAAATGTTCCAAATATGCCCAAAGAAATAAGTGATGCAGTAACTGGCTTTCTTGTTGAGGGCCAAATGCTGTCTGTTCCTGCACAAGTGAACGTCAGTTCTGCAAATGAACTAAAGGATCCAGCTTCTGGAGATGTGAAAAGTATCAGTTTGAATGGTTTGGAAGGAAACTCTAAAAGCGCAACTCCTATGCGATTGAGGTGTAAGGGTAAAAAAACCTCAAAATTATTGAAGAAGAGGTATGTGCTAAGGTCTATAGGAAGCAGTGACAGAGCTTTGCGGTCAAGGACACAGGAAAAACCTAAACCACCTGAATCAAATACTAATTTGGATGATGTTAATAATGATGGAGTGAAAAGGAAAAGAGGTAGGAAGAAGAAAAAGAGGGGAAGGGAGGGAGTGATTGATGAATTTTCTAGAATCAGAGCTCGGTTAAGATATTTATTGAACCGAGTAAGCTATGAGCAAAGCTTGATTGATGCTTACTCTGGTGAGGGCTGGAAAGGATACAGCATGGACAAATTAAAGCCTGAAAAGGAACTTCAACGGGCTAAGTCTGAAATTCTTCGACGTAAATTGAAAATTAGGGATCTATTTCGAAATTTAGATTCATTGTGTGCCGAAGGAAGGATTCCAGAATCTCTGTTTGATTCTGAAGGAGAGATTGACAGTGAGGATATATTCTGTGCCAAATGCAGTTCCAAAGAGTTGAGCGCTGATAATGACATAATTCTATGTGATGGTGCTTGTGAACGCGGATTTCACCAGCTATGCTTGAATCCTCCATTGTTAACTGACAATATTCCACCTGGCGATGAGGGTTGGCTATGCCCAGGATGTGATTGCAAAGATGACTGCATGGATCTTGTGAACGACTCCTTGGGAACAAATCTCTCTCTTGAGGACTCTTGGGAGAGGGTTTTTCCGGAAGCAGCTGCAGCTGCTGGAAATAATGTGGATCACAACCTGGGACTTCCTTCTGATGATTCTGATGATGATGATTATAATCCTAATGTTCCAGAAGATGTGGAGGTTGAAGGCGGTGAATCAAGTTCTGATGAATCTGAGTATGCTTCTGCTTCTGAGAAATTGGAGAAATCAAGCCATGAGGATCACTTGGGCCTTCCTTCTGAAGATTCAGAGGATGATGATTATGATCCTGATGCCCCAGATATTGACAAGAGAGTCACAGAGGAAAGTTCGAGCTCTGATTTCACATCTGACTCTGAGGATCTTGCTGCTGCAATTAAGGATAATCTGTCCCCTGGACAGGATGAAGATATCAAATCTGCATCATTGGATGATGTTAAGACCTTTAAAGGTTCTAGTAGAAAAAAATGCAAAGTCGGTAAGAAGCCATCTATGGCTAATGAACTGTCATCCTTACTAGAGCCAGATCCTGGCCAAGAGAGTTACACCCCTTTTTCTGGGAAAAGGAATGTGGAAAGGTTGGACTACAAAAAGCTGTATGATGAGACATACCAAAGTGATACTAGTGATGATGAAGAATGGACTGAGACTGCTACTCCAAGTAGAAAAAAGAACCTCACTGGCAAAGCGATTCCAGTGTCACCAAATGGAAATACCTCAACTAATTCTACACATACTCCTAGGAGTCAGTATAAAGTTGATAATACAAATAATTCACCCACAAAATCATTTGAAGGCTCTGGGAAATCTGGTTCCAGGGATAAAAAACCAGGATCTTCAACATACAAAAGACTTGGAGAAGCTGCAGTACAGAGACTTTACGAATATTTTAAAGAAAATCAGTATCCAGACCGAGCTACAAAACAAAGCTTGGCACAAGAAGTTGGACTCACTTATCAGCAGGTTACCAAATGGTTTGACAATACCCGTTGGAGCTTCCGGCATTCATCACATAAGGAAACCAACACATATAGAAATGCTTCAGAGCAGGCAACTAACAGTAGAGCTGAAAATGAGGGGGCACTTGGTAGTGAGCAGAGGGACAGTAAATTAGTGTGCCAAGAGGGCAGTGGAGAAAAATCAGAAACCCCAAGTTCTAGAAAAAGGAAGCATATGTCCGAACCCCAAGCATCCGAAGCATGTCAGGATGTTGATGGTGCAGCAACAACTCCTCCTGCTTGCTCACCAAGAGCTAATGAAATGCAAACAGGTCATAAAATGAAGACAAGAAAAAGAAAATGA 2541 0.4132 MTSQTGRLTSHNDRTSGEMHTLEAGTEQHELSEKTQQIGTECLDNEKSVPATVLTSSVIDEQSNQDSDKMTESSVILLPAPPQQDLEKSCQPVEGSCLQQSTLEQVHVHLSNDKSENQSQTFSQNVPNMPKEISDAVTGFLVEGQMLSVPAQVNVSSANELKDPASGDVKSISLNGLEGNSKSATPMRLRCKGKKTSKLLKKRYVLRSIGSSDRALRSRTQEKPKPPESNTNLDDVNNDGVKRKRGRKKKKRGREGVIDEFSRIRARLRYLLNRVSYEQSLIDAYSGEGWKGYSMDKLKPEKELQRAKSEILRRKLKIRDLFRNLDSLCAEGRIPESLFDSEGEIDSEDIFCAKCSSKELSADNDIILCDGACERGFHQLCLNPPLLTDNIPPGDEGWLCPGCDCKDDCMDLVNDSLGTNLSLEDSWERVFPEAAAAAGNNVDHNLGLPSDDSDDDDYNPNVPEDVEVEGGESSSDESEYASASEKLEKSSHEDHLGLPSEDSEDDDYDPDAPDIDKRVTEESSSSDFTSDSEDLAAAIKDNLSPGQDEDIKSASLDDVKTFKGSSRKKCKVGKKPSMANELSSLLEPDPGQESYTPFSGKRNVERLDYKKLYDETYQSDTSDDEEWTETATPSRKKNLTGKAIPVSPNGNTSTNSTHTPRSQYKVDNTNNSPTKSFEGSGKSGSRDKKPGSSTYKRLGEAAVQRLYEYFKENQYPDRATKQSLAQEVGLTYQQVTKWFDNTRWSFRHSSHKETNTYRNASEQATNSRAENEGALGSEQRDSKLVCQEGSGEKSETPSSRKRKHMSEPQASEACQDVDGAATTPPACSPRANEMQTGHKMKTRKRK* 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0466 846 MobiDBLite consensus disorder prediction 545 565 - -
Dod06g0466 846 MobiDBLite consensus disorder prediction 160 193 - -
Dod06g0466 846 MobiDBLite consensus disorder prediction 747 846 - -
Dod06g0466 846 ProSiteProfiles Zinc finger PHD-type profile. 349 406 IPR019787 -
Dod06g0466 846 MobiDBLite consensus disorder prediction 1 47 - -
Dod06g0466 846 MobiDBLite consensus disorder prediction 450 474 - -
Dod06g0466 846 MobiDBLite consensus disorder prediction 31 47 - -
Dod06g0466 846 SMART PHD_3 351 404 IPR001965 -
Dod06g0466 846 MobiDBLite consensus disorder prediction 441 698 - -
Dod06g0466 846 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 345 408 IPR013083 -
Dod06g0466 846 PANTHER HOMEOBOX PROTEIN HAT3.1 141 803 - -
Dod06g0466 846 MobiDBLite consensus disorder prediction 479 499 - -
Dod06g0466 846 MobiDBLite consensus disorder prediction 603 618 - -
Dod06g0466 846 Gene3D - 692 763 - -
Dod06g0466 846 ProSiteProfiles 'Homeobox' domain profile. 689 749 IPR001356 GO:0003677
Dod06g0466 846 MobiDBLite consensus disorder prediction 211 254 - -
Dod06g0466 846 MobiDBLite consensus disorder prediction 756 773 - -
Dod06g0466 846 Pfam Homeodomain 700 745 IPR001356 GO:0003677
Dod06g0466 846 CDD homeodomain 697 750 IPR001356 GO:0003677
Dod06g0466 846 ProSitePatterns Zinc finger PHD-type signature. 352 403 IPR019786 -
Dod06g0466 846 MobiDBLite consensus disorder prediction 794 809 - -
Dod06g0466 846 Pfam PHD-finger 351 406 IPR019787 -
Dod06g0466 846 MobiDBLite consensus disorder prediction 644 680 - -
Dod06g0466 846 MobiDBLite consensus disorder prediction 13 30 - -
Dod06g0466 846 SUPERFAMILY FYVE/PHD zinc finger 341 409 IPR011011 -
Dod06g0466 846 SUPERFAMILY Homeodomain-like 692 757 IPR009057 -
Dod06g0466 846 SMART HOX_1 691 753 IPR001356 GO:0003677
Dod06g0466 846 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 141 803 - -
Dod06g0466 846 CDD PHD_PRHA_like 351 403 IPR045876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0466 Dod-Chr6 5776021 5780863 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0466 245 803 Homeobox Transcription Factor Family AT3G19510 45.777 7.57e-131 406
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-PHD Dod06g0466 PHD 1e-10 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0466 - - gmx:100306715 1063.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0466 06 5776021 5780863 Dod06g0466 06 5776021 5780863 ECH