Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0464 ATGATGATCAAGGAAGATGAAACAACAGTCACAACAGCCAAGGACCAACCACCTGAAGTGATGATGACTGAAGACAAGAACAATGATGAAAGGGAACATGATAATCCAGAAGAGTGGTTGAACCTGAGCTTAGGAGGCAATTCATCACTCCCAACAGCAGGAGACCCTGATTCACAATCTAGACCAGCAACTGTCAAAGTCTTCTCATGCAACTTCTGCATGAGGAAGTTCTATAGCTCACAAGCATTAGGAGGCCATCAGAACGCCCACAAAAGGGAAAGAGGTGCAGCCAGAAGATATCAGTCCCAAAGGACCATGGCCATGATGGGGTTCAACACTCCTATGCTTAGATCACTTGGTGTCCAGCCCCATTCACTGGTGCAAAAGCCATGCAGAGGTGGAACTGTGGTGGCACCGAGCTTCCATGATGCCTATGCAGGGCTTGGAATGGCATGGACTCCACCTTTCATGCCTGAAGAACAAACGGATCTGGTGTGGCCAGGGAGCTTTCGTCTGGTTCCACAACAACCCGAGCCTCCACAGGAGCCACTCAAGCTTGATTTAGACCTCAGACTATGA 579 0.4905 MMIKEDETTVTTAKDQPPEVMMTEDKNNDEREHDNPEEWLNLSLGGNSSLPTAGDPDSQSRPATVKVFSCNFCMRKFYSSQALGGHQNAHKRERGAARRYQSQRTMAMMGFNTPMLRSLGVQPHSLVQKPCRGGTVVAPSFHDAYAGLGMAWTPPFMPEEQTDLVWPGSFRLVPQQPEPPQEPLKLDLDLRL* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0464 192 ProSiteProfiles Zinc finger C2H2 type domain profile. 68 95 IPR013087 -
Dod06g0464 192 PANTHER ZINC FINGER PROTEIN 4-LIKE 5 192 - -
Dod06g0464 192 MobiDBLite consensus disorder prediction 173 192 - -
Dod06g0464 192 MobiDBLite consensus disorder prediction 19 38 - -
Dod06g0464 192 ProSitePatterns Zinc finger C2H2 type domain signature. 70 90 IPR013087 -
Dod06g0464 192 MobiDBLite consensus disorder prediction 41 61 - -
Dod06g0464 192 SUPERFAMILY beta-beta-alpha zinc fingers 66 94 IPR036236 -
Dod06g0464 192 PANTHER ZINC FINGER PROTEIN 4-LIKE 5 192 - -
Dod06g0464 192 Gene3D Classic Zinc Finger 57 113 - -
Dod06g0464 192 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0464 Dod-Chr6 5762723 5764334 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0464 2 180 C2H2 Transcription Factor Family AT1G24625 35.294 4.22e-22 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0464 - - ahf:112779836 280.411