Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0460 ATGGAGCACAAGGATGATTTCGAAGTGGACCATCTGACCACACCCACAGGGACCAGTTTCTCTCAGTTACTCTTCGGAGATGACGATGAAGACGGGAACAATAATGCGCTAGGTTTTGGTGTGGACCACACCTATAACTACAACCTTAGCCATCATCATCCCCCGGTTTTCTCCATTGACAAGGCAACCACAATGCTGTCTTTTGGGAACTATCAAATTGAAGGGGAGCTGTTACTTACTGAAACCAACGCAACCCCTCAGAAATCTGTCATCACTTCTAGTGATTCTTCATCTGCTTCTTCATGCAACCACACCACCACCGGCATCAGTTCATTATCCAAGCCTAATAATAAAAAGCGAAATGGGTCGGGGCAACAACCGGTGACGAAGGCAGCGGTTGGAGGGCAAAGAGCGCCTAAGAAGACCAAAGCAGAGAACCTCACTTCAACCGTTCATGCTAAGAGGAAGGAGAAGCTTGGGGAACGAATTGCAGCACTACAACAGCTTGTATCCCCCTTTGGGAAGACAGATACAGCTTCAGTGCTTCACGAGGCTATGGGCTACATTCGATTTCTGCATGACCAAGTTCAGGTCCTGTGCTCACCTTACTTACAGCGCTTGCCTTCCTCAACCAACCAACTTCTTCAACATCTACCAGTGCGTCACCATCTCTCACTCATCGCTTTCGCATTCTTGTATTCTTATGATTTATTGCTATTAGTTCGATTTTTAAACCATACTCGCAAGTGGCCAAGCCAAGGTGTTAAGAGGGTAAGTGTTGAGGGTCCCGCGTGA 795 0.473 MEHKDDFEVDHLTTPTGTSFSQLLFGDDDEDGNNNALGFGVDHTYNYNLSHHHPPVFSIDKATTMLSFGNYQIEGELLLTETNATPQKSVITSSDSSSASSCNHTTTGISSLSKPNNKKRNGSGQQPVTKAAVGGQRAPKKTKAENLTSTVHAKRKEKLGERIAALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVLCSPYLQRLPSSTNQLLQHLPVRHHLSLIAFAFLYSYDLLLLVRFLNHTRKWPSQGVKRVSVEGPA* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0460 264 MobiDBLite consensus disorder prediction 89 130 - -
Dod06g0460 264 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 154 204 IPR036638 GO:0046983
Dod06g0460 264 MobiDBLite consensus disorder prediction 89 145 - -
Dod06g0460 264 CDD bHLH_AtbHLH_like 154 199 IPR045239 -
Dod06g0460 264 Gene3D - 136 216 IPR036638 GO:0046983
Dod06g0460 264 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 80 210 - -
Dod06g0460 264 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 143 192 IPR011598 GO:0046983
Dod06g0460 264 PANTHER BASIC HELIX-LOOP-HELIX (BHLH) DNA-BINDING SUPERFAMILY PROTEIN-RELATED 80 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0460 Dod-Chr6 5735368 5737579 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0460 154 231 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 55.696 5.86e-24 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0460 - - gmx:100809317 268.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0460 06 5735368 5737579 Dod06g0460 06 5735368 5737579 ECH