Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0451 ATGGTATCAGCTACATTTAGGCGTATTGTGTCACCTTGTTGGAGACCATCTGATGCTGGGAGAAATTCTAGTAGAAATGGGGATGGAAATGGTCGTTGTGATGGGTTACTTTGGTATAAAGATTCCGGAAGACACATGAATGGTGAATTCTCAATGGCAGTTATTCAAGCAAACAATTTGATGGAGGATCAAAGCCAACTTGAATCAGGCGCCATAAGCTCACTTGCAACTAGTCCTCATGGAACTTTTGTTGGTGTATATGATGGGCATGGCGGTCCAGAAGCTTCACGGTTTGTAAATGACCACCTATTTAAAAATATCAAGAAATTTACTTCAGAGAATCAGGGAATGTCTGCCGATGTTATCAATAAGGCATTCTTGGCAACAGAAGAAGAATTTCTTTCTGTAGTAAGGAAGCAGTGGTTACACAGGCCACAGTTGGCCTCAGTTGGGTCTTGCTGTTTGATAGGCATAATATGTAGCGGGCTGCTCTATGTTGCAAATGCAGGAGATTCTAGAGCAGTATTAGGTAGGATGGATTCGGCTACAAAAGAGATTAAAGCTGTTCAGTTATCCTCTGAGCACAATGCCTGCTTCGAATCTGTCAGAGAGGAGCTGCGCTCATTACATCCTGATGATCCGCAGATTGTAGTTATGAAGCAGCAGGTCTGGCGTGTGAAGGGTCTGATTCAGATTTCGAGATCCATTGGTGATGCCTATCTAAAGAATGCAGAGTTTAACAAAGCACCACTGTTGCCAAAATTTAGACTCTCCGAACCCTTTGAGCAGCCAATCCTCAAAGCTGAACCAGCAGTACTAGTACAGAAACTCAGTCATGGCGATCGATTTCTTATATTTGCATCAGATGGGTTATGGGAACAATTGAGCAATCAGGAAGCAGTTGACATTGTTCAGAGCTGTCCATGTAATGGAGTAGCGAGGAAATTAATCAAAACTGCACTTTGTGAAGCTGCAAAGAAACGAGAAATGAGATACTCAGACTTGAAGAAGATTGATCGAGGGGTGAGGAGACATTTCCATGATGACATCACAGTTATAGTTTTGTTTCTTGATTCCCATTTAATCAGCAGCGGAACTTCTTCACACGGTCCCATGGTTTCAGTCAGAGGAGGTGGTGATAGTGGTGTCGGAATTGGTCTTATAGATGCCTAG 1173 0.4288 MVSATFRRIVSPCWRPSDAGRNSSRNGDGNGRCDGLLWYKDSGRHMNGEFSMAVIQANNLMEDQSQLESGAISSLATSPHGTFVGVYDGHGGPEASRFVNDHLFKNIKKFTSENQGMSADVINKAFLATEEEFLSVVRKQWLHRPQLASVGSCCLIGIICSGLLYVANAGDSRAVLGRMDSATKEIKAVQLSSEHNACFESVREELRSLHPDDPQIVVMKQQVWRVKGLIQISRSIGDAYLKNAEFNKAPLLPKFRLSEPFEQPILKAEPAVLVQKLSHGDRFLIFASDGLWEQLSNQEAVDIVQSCPCNGVARKLIKTALCEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVLFLDSHLISSGTSSHGPMVSVRGGGDSGVGIGLIDA* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0451 390 Gene3D - 39 366 IPR036457 -
Dod06g0451 390 PANTHER ALPHABET, ISOFORM E-RELATED 8 380 - -
Dod06g0451 390 SMART PP2C_4 43 355 IPR001932 -
Dod06g0451 390 Pfam Protein phosphatase 2C 73 324 IPR001932 -
Dod06g0451 390 PANTHER PROTEIN PHOSPHATASE 2C 38-RELATED 8 380 - -
Dod06g0451 390 SUPERFAMILY PP2C-like 57 358 IPR036457 -
Dod06g0451 390 CDD PP2Cc 50 357 IPR001932 -
Dod06g0451 390 ProSitePatterns PPM-type phosphatase domain signature. 83 91 IPR000222 GO:0043169
Dod06g0451 390 ProSiteProfiles PPM-type phosphatase domain profile. 49 357 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0451 Dod-Chr6 5677686 5681723 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0451 3 380 PP2C-type Phosphatase Gene Family AT3G12620 74.670 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0451 K01102 - gmx:100807559 626.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0451 06 5677686 5681723 Dod06g0451 06 5677686 5681723 ECH