Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0447 ATGCCGGAGCTTCGTAGTGGAGTGCGACGCGGTCGCGCTGCAGTAGCACAAAAAGCCTCGGAACCACCTGCACCACCACCAGCACCGGCGAGGAGAAACGTGAAGACACGCGCTGCTGCTGCGGCGAAAGGGAGGCCGAGGACGAGGTTGGCGCCGGCAAAGAAACCGGAGCCCCAGAAACCGGCGATCGTGATACCGGAGGCGGAGAAGAATATTAAGGAGAAAGTTGTGGGCGTGATGGCTGATGATAGCGGAGGGTTGAGTGCCAATAAGGGTGTTGCCCCTGAAGATAACACTCCACCTTTTCCTGAGAGGGTTCAAGTAGGAGGATCACCTATGTACAAGGTTGAGAGGAAACTGGGTAAAGGTGGATTTGGTCAGGTTTTCGTTGGCCGTCGCGAGCGCGCAGCAGGCCCTGGAGCCATGGAGGTGGCTCTGAAATTTGAACATAGGAACAGTAAAGGCTGTAACTATGGCCCTCCTTACGAGTGGCAAGTTTACAACATACTTGGTGGTAGTCATGGAATACCTAAGGTACACTATAAAGGAAGGCATGGAGAACATTACATAATGGTTATGGACATGCTTGGTCCAAGTTTGTGGGATGTCTGGAATTCATCAAGCCAGACGATGTCTGCTGAAATGGTTTCATGTATAGCTGTTGAGTCCTTATCAATACTTGAGAAGATGCACTCGAAAGGCTATGTGCATGGAGATGTGAAACCGGAGAACTTTTTACTAGGTCAGCCAGCTACGGCACAAGAGAAGAAACTGTTTCTTGTTGACCTTGGATTAGCAACAAAGTGGAGAGACAGCTCAAGTGGGCTACATGTTGATTATGATCAGCGCCCTGACATGTTTAGAGGGACAGTTCGGTATGCTAGTGTTCACGCTCATTTGGGAAGAACTGCAAGTAGAAGGGATGATCTTGAATCTCTTGCATACACACTCATCTTCCTTCATAAAGGTCGATTACCATGGCAAGGCTATCAGGGTGATAGCAAATCCTTCCTTGTTTGCAAAAAGAAGATGGGAACATCACCTGAGATGCTGTGCTGCTTTTGCCCTCCTCCTTTTAAGCAATTTCTTGAGACTGTAGTCAACATGAAATTTGACGAAGAACCTAACTATTCCAAGCTAATATCTTTGTTTGATGGTATGATCGGACCAAATCCAGCATTGCGGCCAATTAATACTGACGGTGCTCAAAAGGTTGGGCAAAAGCGGGGTAGATTGAATATTGAGGAAGAGGATGATTCACAGCCCAAGAAGAAGGTTCGTTTAGGGGTTCCAGCTACTCAATGGATTTCAATTTACAATGCAAGATTACCGATGAAACAAAGGTATCATTACAATGTGGCTGATGCAAGGTTAGCGCAGCATGTTGAGAGGGGGATTGCAGATGGCCTTCTTATTAGCTGTGTATCTTCTTGTTCCAATCTATGGGCACTTATTATGGATGCTGGAACTGGCTTTACATCTCAAGTTTACAAGCTGTCACCTATTTTCTTACACAAGGAATGGATCATGGAGCAGTGGGATAAGAACTATTACATTACTTCTATTGCAGGGGCCACTAATGGAAGCTCTCTTGTGGTGATGTCTAAAGGTACACAATATACTCAACAATCGTACAAAGTCAGTGATTCTTTCCCCTTCAAATGGATAAACAAGAAGTGGAAAGAAGGTTTTCATGTCACATCAATGGCTACTGCTGGAAGTCGCTGGGGTGTTGTTATGTCTCGCAATGCTGGATATAGTGATCAGGTGGTCGAACTTGATTTTCTCTATCCAAGCGAGGGCATCCATAGACGTTGGGATAATGGTTATAGAATTACAGCAACTGCTGCTACATGGGATCAATCTGCTCTTATATTAAGCATTCCCAGGCGGAAGCCTGGTGATGAAACTCAAGAAACCCTTCGTACATCTCAATTTCCCAGCACACATGTTAAGGAAAAATGGTCAAAAAACCTTTATCTTGCTTGTTTGTGCTATGGGCGCACTGTATGCTGA 2016 0.4583 MPELRSGVRRGRAAVAQKASEPPAPPPAPARRNVKTRAAAAAKGRPRTRLAPAKKPEPQKPAIVIPEAEKNIKEKVVGVMADDSGGLSANKGVAPEDNTPPFPERVQVGGSPMYKVERKLGKGGFGQVFVGRRERAAGPGAMEVALKFEHRNSKGCNYGPPYEWQVYNILGGSHGIPKVHYKGRHGEHYIMVMDMLGPSLWDVWNSSSQTMSAEMVSCIAVESLSILEKMHSKGYVHGDVKPENFLLGQPATAQEKKLFLVDLGLATKWRDSSSGLHVDYDQRPDMFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLHKGRLPWQGYQGDSKSFLVCKKKMGTSPEMLCCFCPPPFKQFLETVVNMKFDEEPNYSKLISLFDGMIGPNPALRPINTDGAQKVGQKRGRLNIEEEDDSQPKKKVRLGVPATQWISIYNARLPMKQRYHYNVADARLAQHVERGIADGLLISCVSSCSNLWALIMDAGTGFTSQVYKLSPIFLHKEWIMEQWDKNYYITSIAGATNGSSLVVMSKGTQYTQQSYKVSDSFPFKWINKKWKEGFHVTSMATAGSRWGVVMSRNAGYSDQVVELDFLYPSEGIHRRWDNGYRITATAATWDQSALILSIPRRKPGDETQETLRTSQFPSTHVKEKWSKNLYLACLCYGRTVC* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0447 671 MobiDBLite consensus disorder prediction 89 108 - -
Dod06g0447 671 PANTHER CASEIN KINASE I-LIKE PROTEIN 79 644 - -
Dod06g0447 671 Pfam Protein kinase domain 114 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0447 671 MobiDBLite consensus disorder prediction 1 62 - -
Dod06g0447 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
Dod06g0447 671 CDD STKc_CK1 113 384 - -
Dod06g0447 671 PANTHER CASEIN KINASE-RELATED 79 644 - -
Dod06g0447 671 SMART serkin_6 114 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0447 671 SUPERFAMILY Protein kinase-like (PK-like) 114 395 IPR011009 -
Dod06g0447 671 ProSiteProfiles Protein kinase domain profile. 114 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0447 671 Gene3D Transferase(Phosphotransferase) domain 1 97 428 - -
Dod06g0447 671 ProSitePatterns Protein kinases ATP-binding region signature. 120 147 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0447 Dod-Chr6 5657716 5662977 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0447 108 342 AGC Kinase Gene Family AT3G08730 22.363 2.15e-07 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Dod06g0447 Pkinase 8.8e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0447 - - gmx:100819969 1196.03