Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0425 ATGTCATCTCGCATTGTTGCGGACAGTACATTTCCCGTGAACAATAATACAACGCCGTATTTGGGACTGATGGAGCTCGACGACCTCACGCGCCGTCACGGCGGCGGCGGGTCTCCCACTCTGGGACAGCTCCTGAAGCACGTCGGCGACATGCGTAAGGAAGTCACCGGCGACGGCAGCGAGACACCAGTGCACCACGCCCTCGACATCGGCGGCGACGGCGCCGGCATTGAGCCACGCTCGCTGCCGTTCGTCCTCTCCTTCACCAACCTCACCTACAGCGTCAAGGTCCGTCGCAGAATGAGCCTCCCGACGATCCTCTACGGAGGGCGGAGAAGCCGCCTGGGTGCGGCGGCGGTGGCAGAGACTGCGCCGACGGTGGGAGAGAGCATGTTCACTCGCACCAAGACTCTCCTAAACGACATCTCCGGCGAGGCCCGCGACGGCGAGATCATGGCGGTGCTAGGCGCCAGCGGCTCAGGAAAATCAACACTGATCGACGCGCTGGCTAACCGCATCGCGAAGGGGAGGCTGAAAGGAACGGTGGCGCTGAACGGCGAGGCGCTGGAATCGCGCCTCCTGAAGGTGATCTCCGCCTACGTGATGCAAGACGACCTCCTCTTCCCTATGCTCACCGTCGAGGAAACCCTCACCTTCGCCGCCGAGTTCCGACTGCCGCGCACGCTCTCCAAATCGAAGAAAAAGCAGCGAGTGCAGGCTCTAATAGACCAGCTCGGGCTCCGAAACGCGGCGAAGACAGTAATCGGCGACGAGGGCCACCGCGGAGTCTCCGGCGGAGAGCGGCGGAGAGTGTCGATCGGAATCGACATAATCCACGACCCTATCGTCCTCTTCCTTGACGAGCCAACCTCAGGACTTGACTCCACGAGCGCCTTCATGGTAGTGAAAGTGCTGCAGAGAATCGCGCAGAGCGGGAGCATCGTGATCATGTCCGTCCATCAACCAAGCTACAGAATCCTAGGGCTCCTGGACCGCATGATCTTCCTCTCCCGCGGCCAAACCGTTTACAGCGGTTCCCCTGCGCAGTTGCCTTCATTCTTCGCGGAGTTCGGGCACCCAATACCGGAGGCAGACAACCGCACCGAGTTCGCATTGGACCTAATCCGCGATCTTGAAGGTTCCCCAGGCGGAACCAAAAGCCTCGTGGAGTTCAACCGATCGTGGCAGTCCATGAAGCACAATACAGCTGCAGCCTCACCCGCATCAGCACCGTCCGTAGTCAACGACCAAAACGGCATGTCGTTGAAGGAAGCAATCAGCGCATCAATTTCGCGCGGGAAACTAGTCTCTGGTGCAAACGCAACTAACACCAACCCGAACCCTTCCTCAATGGTTCCAACCTTCGCGAACCCTTTCTGGATGGAGATGGCCACGCTGTCCAAACGCTCCTTCTTGAATTCACGTAGGATGCCTGAGTTGTTTGGGATCCGATTGGGTGCGGTCATGGTCACCGGCTTCATCCTTGCAACCATGTACTGGCAGCTCGATGACTCCCCCAAAGGCGTGCAAGAGAGGCTCGGCTTCTTCGCGTTCGCTATGTCTACAACTTTTTACACCACCGCCGACGCGCTCCCTGTGTTCCTTCAAGAACGCTACATCTTCATGCGCGAAACCGCTTACAACGCTTACCGAAGATCCTCGTACCTGGTTTCCCACGCCCTTGTCGCCTTGCCTGCTCTGGTGTTCCTGTCGTTCGCTTTTGCCGCCACCACGTTTTGGGCCGTGGGCCTGGACGGTGGGATATCGGGCTTTTTGTTCTATTTTCTCATTATATTTGCTGCGTTTTGGGCCGGGAACTCGTTCGTCACTTTCCTTTCCGGTGTGGTGCCTCATGTGATGCTGGGTTACACTATCGTGGTTGCCATTCTTGCTTACTTCTTGCTGTTCAGTGGGTTCTTCATCAACAGGGACAGGATCCCGAGCTACTGGATTTGGTTCCATTACTTGTCTTTGGTGAAGTACCCTTATGAGGCTGTTCTGCAGAACGAGTTTGATGACCCTGTGAAGTGCTTTGTGAGGGGTGTGCAGATCTTTGACAACACCCCGCTTGCGTCGGTGCCTAATGCGTTGAAGCTGAAGCTGTTGGATAGCATGAGTAACACACTGGGAACGAAGATCACCAGCTCAACATGCTTGACCACTGGCGCTGATATATTGCAGCAGAATGGGGTCACGGATTTGAGCAAGTGGAACTGCTTGCTGATCACCGTCGCTTGGGGTTTCTTTTTCAGGTTTCTCTTCTACTTGTGCTTGTTGGTGGGAAGCAAGAACAAGAGGAGGTGA 2304 0.5673 MSSRIVADSTFPVNNNTTPYLGLMELDDLTRRHGGGGSPTLGQLLKHVGDMRKEVTGDGSETPVHHALDIGGDGAGIEPRSLPFVLSFTNLTYSVKVRRRMSLPTILYGGRRSRLGAAAVAETAPTVGESMFTRTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKGRLKGTVALNGEALESRLLKVISAYVMQDDLLFPMLTVEETLTFAAEFRLPRTLSKSKKKQRVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPIVLFLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVIMSVHQPSYRILGLLDRMIFLSRGQTVYSGSPAQLPSFFAEFGHPIPEADNRTEFALDLIRDLEGSPGGTKSLVEFNRSWQSMKHNTAAASPASAPSVVNDQNGMSLKEAISASISRGKLVSGANATNTNPNPSSMVPTFANPFWMEMATLSKRSFLNSRRMPELFGIRLGAVMVTGFILATMYWQLDDSPKGVQERLGFFAFAMSTTFYTTADALPVFLQERYIFMRETAYNAYRRSSYLVSHALVALPALVFLSFAFAATTFWAVGLDGGISGFLFYFLIIFAAFWAGNSFVTFLSGVVPHVMLGYTIVVAILAYFLLFSGFFINRDRIPSYWIWFHYLSLVKYPYEAVLQNEFDDPVKCFVRGVQIFDNTPLASVPNALKLKLLDSMSNTLGTKITSSTCLTTGADILQQNGVTDLSKWNCLLITVAWGFFFRFLFYLCLLVGSKNKRR* 768
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0425 767 ProSitePatterns ABC transporters family signature. 263 277 IPR017871 GO:0005524
Dod06g0425 767 Pfam ABC-2 type transporter 320 379 IPR043926 GO:0140359
Dod06g0425 767 Pfam ABC transporter 139 291 IPR003439 GO:0005524
Dod06g0425 767 PANTHER ABC TRANSPORTER G FAMILY MEMBER 6-LIKE 15 760 - -
Dod06g0425 767 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 134 354 IPR027417 -
Dod06g0425 767 SMART AAA_5 148 340 IPR003593 -
Dod06g0425 767 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 115 363 IPR003439 GO:0005524
Dod06g0425 767 Pfam ABC-2 type transporter 464 671 IPR013525 GO:0016020|GO:0140359
Dod06g0425 767 Gene3D - 129 354 IPR027417 -
Dod06g0425 767 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 15 760 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dod06g0425 Dod-Chr6 5467963 5470744 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0425 138 323 Calmodulin-binding Proteins AT2G36910 29.630 5.51e-11 64.7
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0425 K05681 - gmx:100803658 1258.43