Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0415 ATGATCTCTAACAACACAGACCCTCCTCCCACCGCCGCGGTCACCGCCGCGGTCACCGCCGCAGCCTCGCCGTCCGGTTCTTCGAATGACGATCAGCCAGCACCGCCGGCAGCACCCAACATTGTGATGTCCTCCAGGGATCACGATTCTCTCTTTAGCGGTGGCGGCATCAGCTTTCTCTCTGGAAGTCGAAATGGAAGATTTAGCTATGGATATTCCAGTTTCAAGGGTAAAAGGTCTTCAATGGAGGATTTCTTTGAGACCAGAATATCAGAGGTTGATGGTCAGATGGTTGCCTTTTTTGGTGTTTTTGATGGTCATGGAGGTTCCCGGACTGCAGAATACCTGAAAAATAATCTGTTTAAGAACTTAAGTAGCCATCCTGACTTCATCAAAGACACAAAAACTGCTATTGTTGAAGCCTTTAAACAGACAGATGTTGACTACCTCAATGAGGAAAAGGGCCAACAAAGGGATGCTGGGTCCACTGCATCAACAGCTATGTTGTTGGGGGACCGAATTCTTGTTGCAAATGTTGGTGATTCCAGAGTAGTTGCATCTAGAGATGGTTCAGCTGTCCCTTTGTCTATTGATCACAAACCTGATAGATCTGATGAACGTCAGAGGATTGAACAGGCAGGGGGATTCATAATTTGGGCAGGGACATGGAGGGTTGGAGGTGTTCTTGCTGTTTCCCGTGCATTTGGAGACAAACTTCTTAAGCCATATGTTGTTGCTGACCCTGAAATTCAGGAAGAAGAAATAGATGGTGTAGATTTTATAATTATCGCTAGTGATGGTCTTTGGAATGTCATATCAAACAAGGAGGCGGTGTCTTTAGTACAAAATATCACAGATGCAGAAGTGGCATCCAGAGAACTTATTAAAGAAGCTTATGCAAGAGGAAGCTCAGACAACATCACCTGTGTTGTTGTTCGATTTGACTTGTCGTGA 954 0.4549 MISNNTDPPPTAAVTAAVTAAASPSGSSNDDQPAPPAAPNIVMSSRDHDSLFSGGGISFLSGSRNGRFSYGYSSFKGKRSSMEDFFETRISEVDGQMVAFFGVFDGHGGSRTAEYLKNNLFKNLSSHPDFIKDTKTAIVEAFKQTDVDYLNEEKGQQRDAGSTASTAMLLGDRILVANVGDSRVVASRDGSAVPLSIDHKPDRSDERQRIEQAGGFIIWAGTWRVGGVLAVSRAFGDKLLKPYVVADPEIQEEEIDGVDFIIIASDGLWNVISNKEAVSLVQNITDAEVASRELIKEAYARGSSDNITCVVVRFDLS* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0415 317 SMART PP2C_4 58 312 IPR001932 -
Dod06g0415 317 SUPERFAMILY PP2C-like 62 315 IPR036457 -
Dod06g0415 317 PANTHER PROTEIN PHOSPHATASE 2C 11-RELATED 35 317 - -
Dod06g0415 317 Pfam Protein phosphatase 2C 70 307 IPR001932 -
Dod06g0415 317 ProSitePatterns PPM-type phosphatase domain signature. 100 108 IPR000222 GO:0043169
Dod06g0415 317 CDD PP2Cc 68 314 IPR001932 -
Dod06g0415 317 Gene3D - 62 316 IPR036457 -
Dod06g0415 317 ProSiteProfiles PPM-type phosphatase domain profile. 69 314 IPR001932 -
Dod06g0415 317 MobiDBLite consensus disorder prediction 1 34 - -
Dod06g0415 317 PANTHER ALPHABET, ISOFORM E-RELATED 35 317 - -
Dod06g0415 317 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0415 Dod-Chr6 5366003 5370582 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0415 41 317 PP2C-type Phosphatase Gene Family AT1G43900 75.812 8.23e-161 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0415 K17506 - gmx:100776867 539.265