Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0395 ATGATGGTATCGAGGGGGCTGTTCGGGTGGTCCCCACCGCACATACAGCCTCTGACTCCGGTGTCGGAGGTTTCGGAGCCGCCGGAGTCTCCGTCGCCGTACCTGGACCTCGGCGCGGAGACGTCGGGGTCGCAGCAGGTTGAGCTGGAGGAGGAGATCGAGGAGCCTGAGGAGATTGAGCCGCCGCCGGCCGCCGTGCCTTTCTCCCGCCTTTTCGCCTGCGCCGACCGGCTCGACTGGTTCCTCATGATCCTCGGCTCTGTCGCCGCCGCTGCCCACGGCACCGCTCTCGTCGTTTACTTGCACTTCTTCGCCAAAATCCTCCAGGTTCCTCAGCAAGACAATCACTTTCACAGGTTCAAGGAGCTTGCTTTAACCATTGTTTATATTGCTGGGGGAGTTTTTGCTGCTGGTTGGATTGGTAAATTATCCACGAGGATTGTGTCTTTTTTGCTGTGTATTTATGTATCTTGCAGTACTAATTTCTCTTTCTTTATGGTAGAGGTTTCATGTTGGATTTTGACTGGAGAACGGCAGACTGCTGTCATCAGGTCTAAGTATGTTCAAGTATTACTTAACCAAGATATGAGCTTTTTTGATACTTATGGGAACAATGGAGACATCGTGAGTCAAGTATTGAGTGATGTGCTGCTCATTCAGTCTGCTCTAAGTGAAAAAGTTGGAAATTATATTCATAACATGGCTACGTTCTTCAGTGGTCTTGTTATCGGTTTTATCAATTGTTGGCAGATTGCATTGATAACTTTAGCTACAGGTCCATTTATTGTTGCTGCAGGAGGAATATCAAATATTTTCCTCCATAGGCTTGCTGAGAATATTCAGGATGCATATGCTGAAGCAGCCAGCATTGCTGAACAGGCAGTTTCTTATATAAGGACCTTGTATGCGTTTACAAATGAAACACTGGCTAAATATTCATATGCAACGTCACTGCAAGCTACTCTTAGATATGGTATATTAATTAGTCTTGTTCAAGGGCTTGGTCTTGGATTTACATATGGGCTTGCAATATGTTCTTGTGCATTGCAACTCTGGGTTGGAAGGTTCTTGATCGTGCATGAGAAAGCTCATGGTGGTGAAATTTTAACAGCTCTGTTTGCTGTGATTCTAAGTGGCTTGGGATTGAATCAAGCAGCAACAAATTTCTACTCATTTGATCAAGGGCGAATAGCTGCTTATAGATTGTTTGAGATGATAAGTCGATCATCCTCATCTGTTAATCATGATGGCAGTGCTCTTGCTTCTGTGCAAGGAAATATAGAGTTTCGGAATGTTTATTTTAGTTATCTTTCTCGTCCTGAAATCCCTATCTTGAGTGGGTTTTATCTCACTGTTCCTGCTAAGAAAGCTGTGGCACTTGTTGGCAGAAATGGCTCTGGCAAAAGTAGTATTATTCCACTCATGGAGCGGTTCTATGATCCTACATTAGGAGAAGTTCTCTTAGATGGTGAAAACATAAAAAATTTGAAACTGGAATCGCTTAGGAGCCAAATAGGACTGGTCACCCAGGAACCTGCTTTGCTCAGTTTGAGTATAAGGGACAACATTGCTTATGGGAGGGATGCTACCATGGATCAAATTGAAGAGGCTGCTAAAATAGCTCATGCACATGCATTTATCAGCTCCTTAGCTAAAGGTTATGACACACAGGTTGGCAGGGCTGGTATAGCTTTGACAGAAGAGCAGAAAATAAAACTTTCTATTGCAAGAGCTGTGCTTTTGAATCCATCCATTCTTCTGCTTGATGAGGTTACTGGTGGACTTGATTTTGAGGCTGAGAGGTCTGTGCAGGAGGCTCTTGATCTCCTTATGTTGGGACGCTCAACAATAATAATTGCTCGAAGGCTTAGTCTTATTAGGAATGCTGATTATATAGCTGTTATGGAGGAAGGTCAACTTGTTGAAATGGGTACTCATGATGAATTATTGAGCCTGGATGGCTTATATGCAGAGCTTCTTCGATGTGAAGAGGCCACAAAACTTCCCAAAAGGATGCCTGTTCGAAACTATAAGGATACTGCAGTTTTCCAAATTGAGAAAGATTCTTCAGAAAGTCATAGTTTCAAAGAACCATCATCCCCTAAAATGATGAAGTCACCCTCTCTTCAAAGACTTTCTGCCATATTTCGGCCTTCTGATGGCTTATTGAACTCACAGGAATCACCAAAAATTCAGAGCCCACCCCCAGAGAAGATGCTGGAAAATGGTCAGCCGTTGGATGAAAAAGATAAGGAGCCATCAATAAGAAGGCAGGATAGTTTTGAAATGAGACTGCCAGAGTTGCCCAAGATTGATGTTCAGTCTGGTCATCGACAAACATCAGATGGTTCTGATCCTGAATCCCCTATTTCACCTCTTTTAACATCTGATCCTAAAAATGAACGCTCCCATTCCCAGACTTTTAGTAGGCCAGAGAGTCAGTCTGATGATGTTTCGGTGAAAATGGGTGAAGCAAAGGATGCACGGCATCGAGAACAACCCTCATTTTGGAGGCTGGCTGAGCTTAGTTTTGCAGAGTGGCTTTATGCTGTGTTGGGAAGCATAGGTGCTGCTATCTTTGGTTCTTTCAATCCCCTTCTTGCTTATGTTATTGGCCTGGTGGTGACAGCTTACTATGAAATTGATTCATCTCATCGCGAACAAGGGCAGGTAGACAAATGGTGCTTGATCATTGCCTGCATGGGTTTCGTGACAGTTATTGCCAACTTTTTGCAGCATTTCTACTTTGGCATTATGGGGGAGAAAATGACAGAGAGAGTCAGGAGAATGATGTTTTCAGCCATGTTACGCAATGAAACTGGATGGTTTGATGAAGAGGAAAACAGTGCTGACAATTTATCCATGCGCTTGGCCAATGATGCTACATTCGTACGAGCAGCTTTTAGTAATCGACTTTCAATATTTATACAGGACAGTGCTGCAGTTATTGTTGCTTTTCTCATTGGTGTTTTGCTGGACTGGCGATTAGCACTCGTGGCTTTAGCAACACTTCCAATTCTTTGTATCTCTGCCATTGCCCAGAAATTGTGGCTTGCTGGATTTTCAAGAGGTATACAGGAAATGCACAGAAAGGCATCACTGGTTCTTGAAGATGCAGTTAGAAATATCTACACTGTTGTTGCCTTTTGTGCTGGTAATAAGGTAATGGAGCTCTACAGGCTGCAGTTAAATAAAATATTCATGCAGAGTTTTCTTCATGGAGTGGCCATAGGTTTTGGATTCGGCTTATCACAGTTCCTACTCTTTGCTTGCAATGCCCTTCTACTATGGTACACTGCGATATGTATAAAAAAACAATATGTGGATCCACTTACTGCGCTCAAGGAGTACATGGTTTTTTCATTTGCTACATTTGCACTTGTGGAGCCTTTTGGCTTGGCTCCTTACATACTTAAGCGACGCAAATCTCTCATTTCAGTGTTTGAAATTATAGATCGCGTGCCTAAAATTGATCCTGATGATAGCTCTGCATTGAAGCCACCCAATGTATATGGAAGCATTGAATTGAAAAATGTTGATTTTTGTTATCCTTCCCGCCCTGAAGTGTTGGTCTTAAGCAATTTCAGTCTGAAAGTCAATGGGGGCCAAACAATTGCTGTTGTGGGAGTTTCAGGGTCAGGAAAGAGCACTATAATATCTTTGATCGAGAGATTTTATGATCCAGTTGCTGGCCAAGTTTTACTAGATGGGAGGGATTTAAAGCTATACAATTTGAGATGGTTGAGGAGCCACCTCGGTCTGGTTCAGCAGGAACCTATTATCTTTTCGACAACCATAAGGGAAAACATCATATATGCCAGGCACAATGCCAGTGAGGCTGAGATGAAAGAGGCAGCGAGAATAGCAAATGCTCATCATTTCATTAGCAGCTTGCCTCATGGTTATGACACACACGTTGGGATGAGAGGTGTTGACTTAACTCCAGGACAGAAACAGAGAATTGCAATTGCTAGGGTGGTGCTGAAAAATGCACCTATCTTGTTGTTGGATGAAGCTAGTTCATCAATTGAATCCGAGTCAAGCCGAGTGGTACAAGAGGCTCTGGACACACTAATAATGGGGAACAAGACCACTATTTTAATAGCACATCGGGCTGCTATGATGAGGCACGTAGACAACATTGTAGTTCTTAATGGGGGAAGGATAGTGGAGGAGGGGACCCAGGATTCATTGGTTGCGAAGAATGGCCTGTATGTCCGATTGATGCAACCTCATTTTGGTAAGGCTTTGCGTCAGCATCGGCTTGTTTAG 4272 0.4347 MMVSRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDLGAETSGSQQVELEEEIEEPEEIEPPPAAVPFSRLFACADRLDWFLMILGSVAAAAHGTALVVYLHFFAKILQVPQQDNHFHRFKELALTIVYIAGGVFAAGWIGKLSTRIVSFLLCIYVSCSTNFSFFMVEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVIGFINCWQIALITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLIVHEKAHGGEILTALFAVILSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSSSSVNHDGSALASVQGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLESLRSQIGLVTQEPALLSLSIRDNIAYGRDATMDQIEEAAKIAHAHAFISSLAKGYDTQVGRAGIALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERSVQEALDLLMLGRSTIIIARRLSLIRNADYIAVMEEGQLVEMGTHDELLSLDGLYAELLRCEEATKLPKRMPVRNYKDTAVFQIEKDSSESHSFKEPSSPKMMKSPSLQRLSAIFRPSDGLLNSQESPKIQSPPPEKMLENGQPLDEKDKEPSIRRQDSFEMRLPELPKIDVQSGHRQTSDGSDPESPISPLLTSDPKNERSHSQTFSRPESQSDDVSVKMGEAKDARHREQPSFWRLAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLVVTAYYEIDSSHREQGQVDKWCLIIACMGFVTVIANFLQHFYFGIMGEKMTERVRRMMFSAMLRNETGWFDEEENSADNLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAFLIGVLLDWRLALVALATLPILCISAIAQKLWLAGFSRGIQEMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLNKIFMQSFLHGVAIGFGFGLSQFLLFACNALLLWYTAICIKKQYVDPLTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDDSSALKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTIAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRSHLGLVQQEPIIFSTTIRENIIYARHNASEAEMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTQDSLVAKNGLYVRLMQPHFGKALRQHRLV* 1424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0395 1423 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1174 1411 IPR003439 GO:0005524
Dod06g0395 1423 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 417 661 IPR027417 -
Dod06g0395 1423 Gene3D - 1172 1411 IPR027417 -
Dod06g0395 1423 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 427 662 IPR003439 GO:0005524
Dod06g0395 1423 MobiDBLite consensus disorder prediction 14 45 - -
Dod06g0395 1423 Pfam ABC transporter transmembrane region 856 1108 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod06g0395 1423 Pfam ABC transporter transmembrane region 83 377 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod06g0395 1423 Coils Coil 273 293 - -
Dod06g0395 1423 MobiDBLite consensus disorder prediction 742 766 - -
Dod06g0395 1423 SUPERFAMILY ABC transporter transmembrane region 838 1159 IPR036640 GO:0005524|GO:0016021
Dod06g0395 1423 MobiDBLite consensus disorder prediction 774 816 - -
Dod06g0395 1423 Pfam ABC transporter 448 592 IPR003439 GO:0005524
Dod06g0395 1423 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1163 1410 IPR027417 -
Dod06g0395 1423 SUPERFAMILY ABC transporter transmembrane region 70 406 IPR036640 GO:0005524|GO:0016021
Dod06g0395 1423 PANTHER ABC TRANSPORTER B FAMILY 19 141 - -
Dod06g0395 1423 PANTHER ABC TRANSPORTER B FAMILY 153 1419 - -
Dod06g0395 1423 MobiDBLite consensus disorder prediction 687 707 - -
Dod06g0395 1423 Gene3D ABC transporter type 1, transmembrane domain 1143 1171 IPR036640 GO:0005524|GO:0016021
Dod06g0395 1423 Gene3D ABC transporter type 1, transmembrane domain 813 1137 IPR036640 GO:0005524|GO:0016021
Dod06g0395 1423 SMART AAA_5 1201 1388 IPR003593 -
Dod06g0395 1423 SMART AAA_5 454 633 IPR003593 -
Dod06g0395 1423 CDD ABC_6TM_Pgp_ABCB1_D2_like 846 1157 - -
Dod06g0395 1423 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 164 394 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod06g0395 1423 PANTHER ABC TRANSPORTER B FAMILY MEMBER 20-RELATED 19 141 - -
Dod06g0395 1423 CDD ABC_6TM_Pgp_ABCB1_D1_like 83 402 - -
Dod06g0395 1423 MobiDBLite consensus disorder prediction 719 827 - -
Dod06g0395 1423 Gene3D ABC transporter type 1, transmembrane domain 70 674 IPR036640 GO:0005524|GO:0016021
Dod06g0395 1423 Gene3D - 417 664 IPR027417 -
Dod06g0395 1423 Pfam ABC transporter 1192 1340 IPR003439 GO:0005524
Dod06g0395 1423 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 851 1110 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod06g0395 1423 PANTHER ABC TRANSPORTER B FAMILY MEMBER 20-RELATED 153 1419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0395 Dod-Chr6 5116919 5124787 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0395 53 720 Calmodulin-binding Proteins AT2G36910 42.415 5.37e-160 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0395 K05658 - gmx:100799399 2473.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0395 06 5116919 5124787 Dod06g0395 06 5116919 5124787 ECH