Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0382 ATGGTGAACATGATGGAGTGGCAGAAACAGGTGCAGAGGTGGCAGCAGCAGAATGGGAGTAGTGAGAACGGAGGAGGGGAGATGATGTATGTGAAGGTGATGACTGATGAGCAGTTGGAAACTCTGAGGCAACAGATTGCAGTTTATGCCACCATTTGTGAGCAGCTTATTGAGATGCACAGGACCCTCTCTGCTCAGCAGGATCTTGCAGGGGTTAGGCTTGGAAATATATACTGTGACCCATTGATGACATCTGTTGGCCATAAAATAACATCCAGACAAAGATGGACTCCTACACCTGTGCAGCTTCAAATTCTTGAGCGTATATTTGATCAAGGGACTGGAACTCCAAGCAAAGAAAAGATTAAGGAGATTGCTGCTGAACTGAGCCAACATGGCCAAATTTCTGAAACAAATGTCTATAATTGGTTCCAGAATAGGCGTGCTAGATCAAAGAGGAAACTGCAAAATGTGGCACCTGGTAACACTGAATCAGAAGTAGAGACTGAGGTTGATTCTAAGGATAAGAAGACAAAGCCAGAGGAATTTCATTCACAACATGCCATAATTAGTACTGGCTCGGAAAAGCTGTGCTTCCAGAGCCCTGAAGGGTGCTCAGAGTTGCAGTACTTGAATCAAGATTCTAAAAAACCAGATTCCATGTTCCAATCAGATGGCAGCCTAGGAACGACAAGAAATTTTAGTCGCATGTCTGTTTTCGATGAGGTGCTATCAAACTCAAGGAGTGACTATCTAGCTGGAAAAATGGAAGTACCTGGGAGCTACAATTTATACCACCAAGCGGGAGATTACAATTTGGCCTGGTTAAAATTTTAG 837 0.4373 MVNMMEWQKQVQRWQQQNGSSENGGGEMMYVKVMTDEQLETLRQQIAVYATICEQLIEMHRTLSAQQDLAGVRLGNIYCDPLMTSVGHKITSRQRWTPTPVQLQILERIFDQGTGTPSKEKIKEIAAELSQHGQISETNVYNWFQNRRARSKRKLQNVAPGNTESEVETEVDSKDKKTKPEEFHSQHAIISTGSEKLCFQSPEGCSELQYLNQDSKKPDSMFQSDGSLGTTRNFSRMSVFDEVLSNSRSDYLAGKMEVPGSYNLYHQAGDYNLAWLKF* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0382 278 SUPERFAMILY Homeodomain-like 91 155 IPR009057 -
Dod06g0382 278 Gene3D - 95 159 - -
Dod06g0382 278 PANTHER WUSCHEL-RELATED HOMEOBOX 13 3 274 IPR044559 GO:0003700
Dod06g0382 278 SMART HOX_1 91 158 IPR001356 GO:0003677
Dod06g0382 278 ProSiteProfiles 'Homeobox' domain profile. 89 154 IPR001356 GO:0003677
Dod06g0382 278 MobiDBLite consensus disorder prediction 152 183 - -
Dod06g0382 278 Pfam Homeodomain 93 153 IPR001356 GO:0003677
Dod06g0382 278 PANTHER - 3 274 - -
Dod06g0382 278 CDD homeodomain 93 154 IPR001356 GO:0003677
Dod06g0382 278 MobiDBLite consensus disorder prediction 167 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0382 Dod-Chr6 5053969 5056765 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0382 4 274 Wox Gene Family AT4G35550 50.333 3.38e-87 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Dod06g0382 Homeodomain 5.5e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0382 - - pvu:PHAVU_007G011600g 406.757