Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0375 ATGATTTGTCTCCTGGTTTGTCAGTCTCGCTTGTGGGTAGTGACCATCTTGTTCTACACATGTGTTTTGATCCCACTGATGCAACTCAAAAGGGCACTTGCAAGCATGCTTGGTCTCATGGCTATGTTCTCTTATGACAGCAAAGGTATAGCCAAGGAGATGGAGTTCCCAGAAGTTCCTTCCTTACCGGTGGCCAGGTTCCAAGATTTGCAGGGCCATCATTATTCTGCAGGAGGAGATGGAAACACAGAGGAGATTTGCTCCATTTGCTTGGTGGAGTTTGAAGGGGAAGATGCTGTGAGCAAGCTGAGTAGATGTGGGCATGTGTTCCATGTCAGATGCATTGAGCAATGGCTAGACCGCAACCAATTCTCTTGCCCACTTTGTAGGTCATGTTTATTTTCTGATCAACATCATATTCATACCAAGGAATAG 435 0.4575 MICLLVCQSRLWVVTILFYTCVLIPLMQLKRALASMLGLMAMFSYDSKGIAKEMEFPEVPSLPVARFQDLQGHHYSAGGDGNTEEICSICLVEFEGEDAVSKLSRCGHVFHVRCIEQWLDRNQFSCPLCRSCLFSDQHHIHTKE* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0375 144 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 134 - -
Dod06g0375 144 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 47 134 IPR013083 -
Dod06g0375 144 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 1 134 - -
Dod06g0375 144 SUPERFAMILY RING/U-box 80 136 - -
Dod06g0375 144 ProSiteProfiles Zinc finger RING-type profile. 87 130 IPR001841 -
Dod06g0375 144 SMART ring_2 87 129 IPR001841 -
Dod06g0375 144 Pfam Ring finger domain 87 130 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0375 Dod-Chr6 4998035 4998891 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0375 1 131 C3H Transcription Factor Family AT4G38140 39.394 3.56e-22 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0375 - - pvu:PHAVU_007G012000g 184.496