Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0338 ATGTCTCGGACAACCAGTGTCCCTCCTCCTGCCTTCCAGTCTATCAAGTCATTGCCTCCTGAGTACAAATTTGCTAATAATCCGAATGGTGATCTTTTGGGAAAAAATGGCGGTGTTAGATTGAGGGGTAGTGATCTGGTTCGATCGAGTAGTCCTGCAAATGGTTCACTAGTAGTGGACGTTTCTAAGGAAGTTCTCAACCGTCCTGGTGGTGACATGGATCTTTTCGATGAGGATTCGCCTTATGGAAATGGTAGGCCGTTGGAAGACAGGCCATCGAATGCTGGTGAAGACTTAGAACCTGTCCCTTTGCCCCTCACATCAAATTCAACATCCTCTAGGGAAAGCAGGTGGAGCGATACAACTCCTTATGCTTCAAAGAAGAAGCTTCAGTCTTGGCTTCAACATTCAAGTGGGAATTGGGAGCTGGTGAAGATAATAACAACTTCTGGGAATGAGTCTGTCATTTCACTGCCTGATGGGAAAGTTTTAAAGGTGAAAGATGAAAGCTTGGTACCAGCAAATCCTGATATTCTTGATGGTGTGGATGACCTCATGCAGCTTAGTTATTTGAATGAACCATCAGTCTTATACAACTTGCAATATAGATACAATCAGAATATGATTTATACAAAAGCAGGGCCTGTTTTGGTTGCCATAAATCCCTTTAAGAAAGTTCCTCTGTATGGTAATGATTATATTGAAGCCTACAAGCATAAATCAATCGAAAGCCCTCATGTATATGCCATTACTGACACAGCTATCCGAGAAATGATACGGGTAGAACATACAATAATTCTTATCATCTACCTATTCAGCGGTGAGAGTGGAGCGGGGAAGACTGAGACAGCAAAGATAGCAATGCAGTACTTGGCTGCCCTTGGTGGTGGAAGTGGAATAGAGTATGAGATATTGAAGACTAATCCAATACTAGAGGCATTTGGTAATGGAAAAACATTGAGAAATGACAACTCGAGTCGTTTTGGCAAGCTCATTGAGATTCACTTCAGTGAAACTGGAAAAATATGTGGTGCTAATATTCAAACGTTTTTGCTGGAGAAGTCTAGAGTTGTCCAATGCAATGAAGGGGAAAGGTCGTATCATATATTTTATCAGCTATGTGCTGGGGCACCACCGTCTCTAAGGGAGAAGCTAAATCTACAAAGTGCTGAAGACTATAAATATCTGAGGCAGAGCAATTGTTATTCAATAACTGGTGTTAACGATGCGGAAGAGTTTCGCATCGTCATGGAAGCACTGGATGTTGTCCATATTAGCAAAGAAGATCAGGAGAGTGTATTTGCAATGCTTGCTGCAGTATTATGGTTAGGAAATGTATCATTTACAGTGATTGACAATGAAAATCATGTTCATGCTGTTGAAGATGAGGGGCTGTTGAGCGTTGCCAAGTTGATTGGCTGTGACATTGAAGATCTCAAGTTGACATTAACAACTCGCAAAATGAAAGTTGGTAATGACATTATTGTCCAAGAGTTGACTCTCTCTCAGGCTATTGATGCGAGGGATGCTTTGGCGAAGTCAATATATGCCTGTCTGTTTGATTGGCTAGTTGAACAAATAAACAAATCACTTGCTGTAGGCAAAAGACGCACAGGCAGATCAATCAGTATTCTAGATATTTATGGCTTTGAGTCATTCAATAGGAACAGTTTTGAACAGTTCTGCATAAATTATGCAAATGAGAGATTACAGCAACACTTCAATCGTCATTTATTTAAGTTAGAACAGGAGGAATATATACAAGACGGGATTGATTGGGCTAAAGTTGAATTTGAAGACAACCAAGACTGCCTCAATCTTTTTGAAAAGAAACCATTGGGCTTACTATCCCTGTTAGATGAAGAGTCCACTTTCCCAAATGGCACAGATTTAACATTTGCCGACAAGCTTAAGCAGCATTTGAATTGTAATTCATGCTTCAAAGGAGAACGGGACAAGGCCTTTACTGTGTGTCATTATGCAGGGGAGGTCACTTATGATACAACTGGATTCCTGGAAAAGAACAGGGATCTATTGCACTTGGATTCCATCCAACTTCTATCCTCAAGCACATGTCATCTTCCTCAGATATTTGCATCCCATATGCTTACCCAGACCGAGAAGCCTGCAGTTGGTCCCTTACACAAGTCAGGTGGGGCAGATTCCCAAAAGCTAAGCGTTGCCACAAAATTCAAGGGACAATTATTCCAACTGATGCAACGTTTAGAGAGCACAACACCACATTTTATTCGCTGCATTAAACCCAATAACCACCAATCGCCTGGATCATATGAGCAAGGCCTCGTACTGCAGCAGCTGAGATGTTGTGGGGTCCTGGAAGTGGTCCGGATATCAAGATCAGGCTTTCCAACTAGAATGTCTCACCAAAAGTTTGCCAGAAGATATGGTTTTCTTCTCCTCGACAATGTTGCATCTCAGGACCCACTTAGCGTTTCGGTTGCAATTCTTCATCAGTTCAACATTTTGCCTGAGATGTATCAAGTTGGCTACACAAAATTATTTTTCAGAACAGGGCAGATTGGAGTGCTTGAAGATACTAGAAATCGTACTCTCCATGGCATTTTGCGTGTGCAAAGTTGCTTCAGGGGTTACAAAGCTCGTTGTTACCGCAAGAATCTTTGGAGAGGAATCACTAGTCTTCAGTCATTTATTAGAGGAGAGAAAAGCAGAAAGGAATATGCAGCTTCACTGCAGAGATATAGAGCTGCTGTGATTATACAGAAGCAGATGAAAACAGTGTTGGCAAGAACCAAAATGAAGGCTACAAATGATGCTGCAGTTGTCATACAATCATATATTCGTGGCTGGTTGGTCAGAAGATGCTCAGGAGATTTAGGATTATTGAAATCTGGAGGCACGAAGACTAATGAGTCAGACGAGGTTCTGGTAAAGTCATCTTTCCTAGCTGAATTACAACGACGGGTACTTAAGGCTGAAGCTGCCCTGAGAGAGAAAGAAGAGGAAAATGACATCCTTCACCAACGACTTCAACAGTATGATAGCAGATGGACTGAATATGAATTAAAGATGAAATCCATGGAAGAAGTGTGGCAGAAACAAATGAGATCCCTACAATCTAGCCTATCTATTGCAAAGAAGAGCCTTGCTATGGATGATTCTGAGAGAAATTCAGATGCATCTGTTAATGCAAGTGATGAAAGGGATTATAACTGGGATATGGGAAGTAATCATAGGCGCCAAGAAAGCAATGGGACAAGATCAATGAGTGCTGGTTTAAGTGTTATAAGTCGGATGGCTGAAGAATTCGAGCAGAGGAGTCAAGTATTTGGTGATGATGCCAAGTTCTTGGTTGAGGTAAAATCTGGCCAAGTTGAAGCAAGTTTGAACCCAGACAGGGAACTCAGAAGGTTAAAACAGATGTTTGAAGCCTGGAAAAAGGATTATGGCGCAAGACTGCGTGAAACGAAGGTCATCTTGCATAAGCTTGGAAGTGAAGATGGATCAATGGAGAAAGCAAAAAAGAAGTGGTGGACAAGAAGGAATAGTACAAGGATAAATTGA 3543 0.4152 MSRTTSVPPPAFQSIKSLPPEYKFANNPNGDLLGKNGGVRLRGSDLVRSSSPANGSLVVDVSKEVLNRPGGDMDLFDEDSPYGNGRPLEDRPSNAGEDLEPVPLPLTSNSTSSRESRWSDTTPYASKKKLQSWLQHSSGNWELVKIITTSGNESVISLPDGKVLKVKDESLVPANPDILDGVDDLMQLSYLNEPSVLYNLQYRYNQNMIYTKAGPVLVAINPFKKVPLYGNDYIEAYKHKSIESPHVYAITDTAIREMIRVEHTIILIIYLFSGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNGKTLRNDNSSRFGKLIEIHFSETGKICGANIQTFLLEKSRVVQCNEGERSYHIFYQLCAGAPPSLREKLNLQSAEDYKYLRQSNCYSITGVNDAEEFRIVMEALDVVHISKEDQESVFAMLAAVLWLGNVSFTVIDNENHVHAVEDEGLLSVAKLIGCDIEDLKLTLTTRKMKVGNDIIVQELTLSQAIDARDALAKSIYACLFDWLVEQINKSLAVGKRRTGRSISILDIYGFESFNRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVEFEDNQDCLNLFEKKPLGLLSLLDEESTFPNGTDLTFADKLKQHLNCNSCFKGERDKAFTVCHYAGEVTYDTTGFLEKNRDLLHLDSIQLLSSSTCHLPQIFASHMLTQTEKPAVGPLHKSGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNHQSPGSYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLDNVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRTGQIGVLEDTRNRTLHGILRVQSCFRGYKARCYRKNLWRGITSLQSFIRGEKSRKEYAASLQRYRAAVIIQKQMKTVLARTKMKATNDAAVVIQSYIRGWLVRRCSGDLGLLKSGGTKTNESDEVLVKSSFLAELQRRVLKAEAALREKEEENDILHQRLQQYDSRWTEYELKMKSMEEVWQKQMRSLQSSLSIAKKSLAMDDSERNSDASVNASDERDYNWDMGSNHRRQESNGTRSMSAGLSVISRMAEEFEQRSQVFGDDAKFLVEVKSGQVEASLNPDRELRRLKQMFEAWKKDYGARLRETKVILHKLGSEDGSMEKAKKKWWTRRNSTRIN* 1181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0338 1180 Pfam Myosin head (motor domain) 182 843 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod06g0338 1180 Gene3D - 859 907 - -
Dod06g0338 1180 Gene3D - 908 950 - -
Dod06g0338 1180 ProSiteProfiles Myosin motor domain profile. 180 855 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod06g0338 1180 MobiDBLite consensus disorder prediction 1 37 - -
Dod06g0338 1180 MobiDBLite consensus disorder prediction 104 123 - -
Dod06g0338 1180 PANTHER MYOSIN 10 1180 - -
Dod06g0338 1180 ProSiteProfiles IQ motif profile. 859 886 IPR000048 GO:0005515
Dod06g0338 1180 Gene3D Kinesin motor domain 183 784 IPR036961 -
Dod06g0338 1180 Pfam IQ calmodulin-binding motif 861 876 IPR000048 GO:0005515
Dod06g0338 1180 Pfam IQ calmodulin-binding motif 931 947 IPR000048 GO:0005515
Dod06g0338 1180 Pfam IQ calmodulin-binding motif 883 900 IPR000048 GO:0005515
Dod06g0338 1180 PRINTS Myosin heavy chain signature 267 292 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod06g0338 1180 PRINTS Myosin heavy chain signature 309 336 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod06g0338 1180 PRINTS Myosin heavy chain signature 594 622 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod06g0338 1180 PRINTS Myosin heavy chain signature 541 569 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod06g0338 1180 PRINTS Myosin heavy chain signature 210 229 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod06g0338 1180 CDD MYSc_Myo8 194 843 IPR036022 -
Dod06g0338 1180 SMART MYSc_2a 174 856 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod06g0338 1180 MobiDBLite consensus disorder prediction 68 123 - -
Dod06g0338 1180 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 10 1180 - -
Dod06g0338 1180 MobiDBLite consensus disorder prediction 1042 1056 - -
Dod06g0338 1180 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 127 176 IPR004009 GO:0003774|GO:0005524|GO:0016459
Dod06g0338 1180 Gene3D Myosin VI head, motor domain, U50 subdomain 426 723 - -
Dod06g0338 1180 Gene3D - 788 856 - -
Dod06g0338 1180 MobiDBLite consensus disorder prediction 1042 1081 - -
Dod06g0338 1180 ProSiteProfiles IQ motif profile. 882 909 IPR000048 GO:0005515
Dod06g0338 1180 Gene3D - 551 745 - -
Dod06g0338 1180 ProSiteProfiles IQ motif profile. 929 958 IPR000048 GO:0005515
Dod06g0338 1180 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 901 IPR027417 -
Dod06g0338 1180 Gene3D - 365 424 - -
Dod06g0338 1180 SMART iq_5 905 927 IPR000048 GO:0005515
Dod06g0338 1180 SMART iq_5 856 878 IPR000048 GO:0005515
Dod06g0338 1180 SMART iq_5 879 901 IPR000048 GO:0005515
Dod06g0338 1180 SMART iq_5 928 950 IPR000048 GO:0005515
Dod06g0338 1180 Coils Coil 975 1009 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0338 Dod-Chr6 4649974 4660369 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0338 11 1178 Myosins gene family AT1G50360 75.641 0.0 1786
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0338 - K10357 gmx:100801124 2045.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0338 06 4649974 4660369 Dod06g0338 06 4649974 4660369 ECH